Gene
| Gene Model ID | pfu_aug2.0_47.1_23321 |
|---|---|
| Locus | scaffold47.1 : 187018 ... 207952 : - |
| To GenomeBrowser | scaffold47.1:187018..207952 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug1.0_23362.1_04291 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_47.1_23321.t1 | 5 | 1 | K1377 | 78 | 164 | 8.4e-18 | 63.7 | 2.0 | 15000.0 | -8.4 |
| pfu_aug2.0_47.1_23321.t1 | 5 | 2 | K1377 | 471 | 557 | 8.4e-18 | 63.7 | 0.27 | 2000.0 | -3.7 |
| pfu_aug2.0_47.1_23321.t1 | 5 | 3 | K1377 | 631 | 707 | 8.4e-18 | 63.7 | 2.0e-19 | 1.5e-15 | 56.3 |
| pfu_aug2.0_47.1_23321.t1 | 5 | 4 | K1377 | 865 | 907 | 8.4e-18 | 63.7 | 3.0e-08 | 0.00022 | 19.3 |
| pfu_aug2.0_47.1_23321.t1 | 5 | 5 | K1377 | 986 | 1027 | 8.4e-18 | 63.7 | 0.4 | 3000.0 | -4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_47.1_23321.t1 | gi|676461782|ref|XP_009056054.1| | hypothetical protein LOTGIDRAFT_161924 [Lottia gigantea] | 4.0e-20 |
| pfu_aug2.0_47.1_23321.t1 | gi|524907299|ref|XP_005108770.1| | PREDICTED: flocculation protein FLO11-like [Aplysia californica] | 2.0e-16 |
| pfu_aug2.0_47.1_23321.t1 | gi|198427911|ref|XP_002122751.1| | PREDICTED: uncharacterized protein LOC100175716 [Ciona intestinalis] | 2.0e-10 |
| pfu_aug2.0_47.1_23321.t1 | gi|260818402|ref|XP_002604372.1| | hypothetical protein BRAFLDRAFT_85465 [Branchiostoma floridae] | 2.0e-10 |
| pfu_aug2.0_47.1_23321.t1 | gi|637286752|ref|XP_003219349.2| | PREDICTED: uncharacterized protein KIAA1377 homolog [Anolis carolinensis] | 3.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_47.1_23321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23321.t1 atgagtcaaggatgtgccaaagcacacagcagatctggtcggggattggacgaaacccttcgattaatcagagggcactc agcacacagtggtcatcatcgccatcgtaatggaggtcaaggtcaaagtccaaggcaaacttacaacgatgccctgaata aaccatacttcaataagtactccagtcacagaccaaactcacctccggaaaaatgtgacagtcaagctaaaaatagactt cacaataatagtctgcataatcttacaaacagcaagagcttattcgagcagcaactagagcaacagcaacgaatgcttgc ggaccaacagaaacaagcgatacatgactttaacaatgcagtgatgcaggaaatgtcagaggataaccatggttatggtt ataataattacgataaccacgatcagtgtgatagtgacagtttgtccagtgtggatagcttggagaggtcacagaaccaa gatagtcattatggaaatggttacacgcatggaaacacaggtgaaatccagccgatggagcatatggtcagtaatagtaa cgtcataaggactagctcatcaggtgtactaactagggatacacaccagaatgtgagggatgtgtcggctcagttaaatt caaactttgcaaatatgtattcaccaatgaatccttcagatatgacatctcagattgactcttacaatgttgatcaaact caaaatatttcacaaaagaatatgagccgagccgaaatgaaaccagacttccagtcagcatatcaaggtgtgaacaaagg aaatgataatagaccaaaggttcaactccgagcatgggctactccatctcctgtagatggcgctcactctagtaaggctc cggtcatacctatgacaaacactaatccgtatacacccagaaataccatgacaacggtcactatgactacaacgtatgat gaaaacaaatcaaaaaacttacagaacaatgatagacttgaggaaaggccaaatcctctaaatgtatacagcaatagatt agcatcacatgtgataccaaatgggtataatgttatagacagtaatgtaggagataatgttcaagagagagaagtccaac gtaatggcacaagaaatcttgagttccttgaaactgtcaccaacactttagataaaaaagtacagtcacaaggcattgta aatgtaaccatgcctgtttcccagggtaccgtgcctgtttcccagggtgccatgcctgtttcccagagtgctttgcctgt ttcccagggtgccctgcctttttcccagggtactgtgcctgtttcccaaggtgccatgcctgtaactcatggtgccttga ataatattgataacagggacaacaactccttatccaagcctctacccagcactacaaacatgtcggtgccaaattcacaa ggagtagctagtaagctacctaggccagttagtgctaaaaacaattctaatataatgcataattcggaagctataattcc atccactaatggaaacggtgcaatgtcctccaaatctcacacctcgtcattcgccagtacagtcccgattcctccaggat ctccaaggactattaacacatacaacacaccacaaaaaaccatgggtgtggtacgctcaaataataccaacaatggcaca tctaacggacctgatgaaaatcagaaagtttttgtcaacctaggcaatgataaaccacaggtgcgacaagttacaaatgt caagtttgccgcaagtgttgtcaacggaaatgtacacatgaataattacggcaaaatgcaggtcttacctgacaagccag tgataatacctcaacaaacagaaaaagtttacgaaggaaaacctattagtggaaagaaagctagcgatgacactactgaa agtatggcagccttcctaacagcagagcatctagcccagcaatctatgtctgacagtcaaatacaggccgccatggatga cgcacagagacaacaacagattgttcaggctggcagacctccacaacaaaaagtgccgtctgccttatctatagaggaac agcgtttattagaatcactggataggctgaatgaaaaattaaaaacagcgcagaaacatcaccgtcctgtttctgccaag gtatcgtcacaaaccaaaatagagacgaggattccgcgtgtttctagtgccgggtctcaaagggctccaactcagcccaa acctcacaagtcatctttggtacgaccccaggccacagcccatatcatagctcacacgtctgccgctacagccattctca gtaatagctactctgactcgaatgacaaaaaagtgacattcaccaataacgacttcatgtctaaggtccctatgacaggt ccgctgaagacaagctctatcacaccaacagttacagaggtcactgtgtattctgtaccgggcatgaggatgaactatac gtctaacacgtcaaaagtcggcagacaggatgatacaatgacgacaaatggagattcaggctatccaatgtcaagtgcag gagcacctacttatcataatgtatcaagtgataataattacgtaaatcatgtagggcctgtctataacgagaatggaatg agaatagatcggacaccaactgacgatgagatcaattttctgtgggaaaaagtaaggacttgcttaaatagaaattccac agctggacctcctgtgtcggagccaccaaagtcaaacacagtgactgtgacagatgctggtacacgtcaagctgctcctg tatcaaataagtatatagatggcgctgcactgtcccaaatgggaccaaaatcacgggttacggtgatcaaccaacaaaat ctgacacaagcaataaggaacaaccaacaaattgactacagaccaacccagaacggggaaatgatggggccgtaccaaaa acgatttggtttactgcagcagagaaaacaacagcaaaatccaaatagtttgaccaataaaaatggcctccaacgacaaa ccattacctaccatggtccggtgtatagtaatcaggaaccatcacccaaaactaacacagcttttcaaacccctccagaa gcaaaactcacattaaggtgcttctag |
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Protein
| Protein ID | pfu_aug2.0_47.1_23321.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23321.t1 MSQGCAKAHSRSGRGLDETLRLIRGHSAHSGHHRHRNGGQGQSPRQTYNDALNKPYFNKYSSHRPNSPPEKCDSQAKNRL HNNSLHNLTNSKSLFEQQLEQQQRMLADQQKQAIHDFNNAVMQEMSEDNHGYGYNNYDNHDQCDSDSLSSVDSLERSQNQ DSHYGNGYTHGNTGEIQPMEHMVSNSNVIRTSSSGVLTRDTHQNVRDVSAQLNSNFANMYSPMNPSDMTSQIDSYNVDQT QNISQKNMSRAEMKPDFQSAYQGVNKGNDNRPKVQLRAWATPSPVDGAHSSKAPVIPMTNTNPYTPRNTMTTVTMTTTYD ENKSKNLQNNDRLEERPNPLNVYSNRLASHVIPNGYNVIDSNVGDNVQEREVQRNGTRNLEFLETVTNTLDKKVQSQGIV NVTMPVSQGTVPVSQGAMPVSQSALPVSQGALPFSQGTVPVSQGAMPVTHGALNNIDNRDNNSLSKPLPSTTNMSVPNSQ GVASKLPRPVSAKNNSNIMHNSEAIIPSTNGNGAMSSKSHTSSFASTVPIPPGSPRTINTYNTPQKTMGVVRSNNTNNGT SNGPDENQKVFVNLGNDKPQVRQVTNVKFAASVVNGNVHMNNYGKMQVLPDKPVIIPQQTEKVYEGKPISGKKASDDTTE SMAAFLTAEHLAQQSMSDSQIQAAMDDAQRQQQIVQAGRPPQQKVPSALSIEEQRLLESLDRLNEKLKTAQKHHRPVSAK VSSQTKIETRIPRVSSAGSQRAPTQPKPHKSSLVRPQATAHIIAHTSAATAILSNSYSDSNDKKVTFTNNDFMSKVPMTG PLKTSSITPTVTEVTVYSVPGMRMNYTSNTSKVGRQDDTMTTNGDSGYPMSSAGAPTYHNVSSDNNYVNHVGPVYNENGM RIDRTPTDDEINFLWEKVRTCLNRNSTAGPPVSEPPKSNTVTVTDAGTRQAAPVSNKYIDGAALSQMGPKSRVTVINQQN LTQAIRNNQQIDYRPTQNGEMMGPYQKRFGLLQQRKQQQNPNSLTNKNGLQRQTITYHGPVYSNQEPSPKTNTAFQTPPE AKLTLRCF |
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