Gene
| Gene Model ID | pfu_aug2.0_47.1_23323 |
|---|---|
| Locus | scaffold47.1 : 238053 ... 254596 : + |
| To GenomeBrowser | scaffold47.1:238053..254596 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug1.0_99033.1_20858 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_47.1_23323.t1 | 2 | 1 | Methyltransf_32 | 145 | 162 | 8.2e-25 | 87.1 | 1.4 | 3500.0 | -2.5 |
| pfu_aug2.0_47.1_23323.t1 | 2 | 2 | Methyltransf_32 | 206 | 533 | 8.2e-25 | 87.1 | 5.7e-26 | 1.4e-22 | 79.8 |
| pfu_aug2.0_47.1_23323.t1 | 5 | 1 | WD40 | 737 | 777 | 8.9e-17 | 60.2 | 2.5e-06 | 0.0061 | 16.4 |
| pfu_aug2.0_47.1_23323.t1 | 5 | 2 | WD40 | 795 | 818 | 8.9e-17 | 60.2 | 0.23 | 570.0 | 0.6 |
| pfu_aug2.0_47.1_23323.t1 | 5 | 3 | WD40 | 885 | 912 | 8.9e-17 | 60.2 | 0.018 | 43.0 | 4.1 |
| pfu_aug2.0_47.1_23323.t1 | 5 | 4 | WD40 | 972 | 998 | 8.9e-17 | 60.2 | 0.00019 | 0.48 | 10.4 |
| pfu_aug2.0_47.1_23323.t1 | 5 | 5 | WD40 | 1003 | 1039 | 8.9e-17 | 60.2 | 1.1e-08 | 2.7e-05 | 23.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_47.1_23323.t1 | gi|524955181|ref|XP_005077566.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_47.1_23323.t1 | gi|676475111|ref|XP_009060367.1| | hypothetical protein LOTGIDRAFT_105898 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_47.1_23323.t1 | gi|524910215|ref|XP_005109989.1| | PREDICTED: methyltransferase-like protein 25-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_47.1_23323.t1 | gi|402883540|ref|XP_003905272.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 [Papio anubis] | 0.0 |
| pfu_aug2.0_47.1_23323.t1 | gi|544463373|ref|XP_005568027.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1 [Macaca fascicularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_47.1_23323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23323.t1 atgcatggagaaaagttccatgtcaacaatgacttggagaaaggggaaaaaattctgaaaatcaagggtttactcaagag aaatttgtccttcttacaacattacctaccatttgccaatagtcattccaaggattttatcacccatagacattgggaga acttcctaccagacagtatcagatcagagctgctctcccttactgatgaagaccttctcacactgcctcacaccacaaag gttgatgaaatgaatgatgacattgttaaagatgacaatgagtgggaatttaagtgtgattattttatgaagtcaccaaa gaaacatacattacgtaggagcggtattttgtctgagttgagtgatttggcttccagacttggtctttctgataacaagg atcttgtgttcatatctcagtacatggacaagaagaagagtcatgaagtagaggtgatgggggacgtatgtgctgcatta gctacagtggagaatatagacatgaaacatacattacgtaggagcggtattttgtctgagttgagtgatttggcttccag acttggtctttctgataacaaggatcttgtgttcatatctcagtacatggacaagaagaagagtcatgaagtagaggtga tgggggacgtatgtgctgcattagctacagtggagaatgtagacatggttgtggatttagggagtggtaagggatatctt agtacacacctcgccttacaacatgagctcaacgtgctgggagtggacgcacagaccactaacactgctggagcatccag acggagggaggtactgaccaaacagtgggcgggactgaccaggaatgccaaggtcaagaacgagaggggagacagcaaaa aactgggcaagaaactgaagaaaaagatgaggaagctgcaagatgaaagggaaggaagaggaaatactgcaaacacaggg aaggtgaacgaaaatacaaatgctgtagaaattagtgaggaagtaatgtttggggtggggagcttatttctggattccga cagagaagatttattgtctgaagggaaagttgactctgatgcttactccattaggactctggaaaaagaagatagaatag gtagacaggatgagctggcatcagatgattttgatcctggaagaatggaaaagaaaaacgaaaaagatagtgattctcat ataggactagactcttctttagatgatgaaacagcaaagctcagtaaatctgatgtaaaacgtgacagtgaaatacctga tgcatcccaaaaggataaggtagcaaagttagttgcttgtaataagaaagccagtcaacatcattttcctgtaacactat acattgacacaaatacgaacctgacagaggtcatagagcagacgctagctgccaataaccgtgagttgccagtgaggcac aaagaaggggacgttacaagtaacagggacatgaagttaatgataacaggacttcacacatgtggagggttaggggccag taccatgcggttgttcgttacatgtgagcaggctccggtgctgtgtaacgtggggtgctgttaccatttaatggaggaag aatttgtagcaaatccctattcggagcgtactcaagaaaaaggtgacgaacatgctggttttccaatgagcgccttcttg cgtaatcatagagttggcctcggacagtacgccagaagctttgcttcccaagctgtgactcgaaggcagcaggatacaaa gctgatagccaaacagtttccccgtattatgttacaagctgtactgtcagacattctgggttttaccagtgacgagtgga agggacttcgtaaacttgatcagaaatgtaaagatctcccagaatatatccataaagctgtgcacaaattaaatctacca gttgatcagttcagtgaggaaagagttcaggaatgcttagatcaatatgcagtataccaggaatggtttattgcatattt ccagctgaagcttgtgttagcaccctgtatcgaggctgtagtcttgctggacagaatgctttatctattggagcaggact gtatagatgatgtgatgttagtacagttgtttgatccggtgaaatcccctcgatgccatgctatcatcgcattcaagaaa ggaaaccatgctttgaatatgataaggatgagtagccagcctgcccctgatcctgtgtatactctccgtggggcagggag tcccatcacctacctcacattccatgatggtcctggtccccatcaagatctatacagtggtacacaggacggcaagattc acatctgggacatggaagtacgcagaataaaggccagtctagacggacaccctggtcaggctgtgttatggatagaattc acaccttgtgggaagatgttgacttttggaagagatggaatccttaatgtatggcagagggctgatacagactggattat tacagataaagtatcaacaagtgcaatagggtttagccccgctggacttctcttggacgaagacgatacagggtatattg tcctaccaagtcggcaaacgtcggtatgtgatgtgtatagaatggagacattgacaaagttagatgaactcaaacctgga gcagaaaaatttggctttgttatgtgtattacatcaatgaaagacaacaaaacagttctgattggttatgaaaatggaag cattgcattgtgggatatttcaaaatgcaaattactgaatagcgtcaaagtttttgaagagtctgttttgtgtgttgatt atcagagtgacttaaataaaggtttttgtggatcagcaacaaacaaaataacttccttcagtgtagatggggatgaagta gttgtgggaaaatcaacggagactttaaaccctggtttcaatcagattagaatcaggggagataagaaaatttttgtaac agcgggttgggaccataatgtgagagttttcagtgtgaagaaattgactcctcttgctgtgctggattaccataaagaca gctgtcagtgcctggctttctctacagagaatctcctggcttgtggatcaaaggaccaacaaatcagtttgtggaaaatt tattga |
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Protein
| Protein ID | pfu_aug2.0_47.1_23323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23323.t1 MHGEKFHVNNDLEKGEKILKIKGLLKRNLSFLQHYLPFANSHSKDFITHRHWENFLPDSIRSELLSLTDEDLLTLPHTTK VDEMNDDIVKDDNEWEFKCDYFMKSPKKHTLRRSGILSELSDLASRLGLSDNKDLVFISQYMDKKKSHEVEVMGDVCAAL ATVENIDMKHTLRRSGILSELSDLASRLGLSDNKDLVFISQYMDKKKSHEVEVMGDVCAALATVENVDMVVDLGSGKGYL STHLALQHELNVLGVDAQTTNTAGASRRREVLTKQWAGLTRNAKVKNERGDSKKLGKKLKKKMRKLQDEREGRGNTANTG KVNENTNAVEISEEVMFGVGSLFLDSDREDLLSEGKVDSDAYSIRTLEKEDRIGRQDELASDDFDPGRMEKKNEKDSDSH IGLDSSLDDETAKLSKSDVKRDSEIPDASQKDKVAKLVACNKKASQHHFPVTLYIDTNTNLTEVIEQTLAANNRELPVRH KEGDVTSNRDMKLMITGLHTCGGLGASTMRLFVTCEQAPVLCNVGCCYHLMEEEFVANPYSERTQEKGDEHAGFPMSAFL RNHRVGLGQYARSFASQAVTRRQQDTKLIAKQFPRIMLQAVLSDILGFTSDEWKGLRKLDQKCKDLPEYIHKAVHKLNLP VDQFSEERVQECLDQYAVYQEWFIAYFQLKLVLAPCIEAVVLLDRMLYLLEQDCIDDVMLVQLFDPVKSPRCHAIIAFKK GNHALNMIRMSSQPAPDPVYTLRGAGSPITYLTFHDGPGPHQDLYSGTQDGKIHIWDMEVRRIKASLDGHPGQAVLWIEF TPCGKMLTFGRDGILNVWQRADTDWIITDKVSTSAIGFSPAGLLLDEDDTGYIVLPSRQTSVCDVYRMETLTKLDELKPG AEKFGFVMCITSMKDNKTVLIGYENGSIALWDISKCKLLNSVKVFEESVLCVDYQSDLNKGFCGSATNKITSFSVDGDEV VVGKSTETLNPGFNQIRIRGDKKIFVTAGWDHNVRVFSVKKLTPLAVLDYHKDSCQCLAFSTENLLACGSKDQQISLWKI Y |
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