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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_47.1_23327
Locus scaffold47.1 : 277783 ... 279583 : +
To GenomeBrowser scaffold47.1:277783..279583
Genes list of scaffold scaffold47.1
Synonym pfu_aug1.0_10775.1_53587

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_47.1_23327.t1 1 1 C1q 36 166 7.1e-17 61.6 5.7e-21 8.5e-17 61.3

Transcript
Transcript IDpfu_aug2.0_47.1_23327.t1
Definition-
>pfu_aug2.0_47.1_23327.t1
atgatcaattttcgaaaagctttgaagacaatggagtcaccatgttatcattttgcagggagattgcttcaactagccaa
tgccatgcaccccaataacgtcatagcattttatgcatacctatctgcaactatcccggcgtcacaagctgttgaaaacc
atgtacttgtatttgatattgccaagagaaatattggtaatgcctaccatccacacactggcatttttagagtcccagag
gccggcgtgtatgtcttcacctggaatctccctaatggtggcgtgccaagttaccataccctgcaacttgttattaattc
agaggtatggggcgctgtccatgcgcactcagttgctaattctgaatttatagaatctacaggcgttgctgtagtccaag
ctaatgctggtgatgatgtatttgtgcggtcggccgcactctcatacaatggtgttattgtcagtaataaatttgccaaa
accttctttgcaggctggaagttgtaa

Protein
Protein IDpfu_aug2.0_47.1_23327.t1
Definition-
>pfu_aug2.0_47.1_23327.t1
MINFRKALKTMESPCYHFAGRLLQLANAMHPNNVIAFYAYLSATIPASQAVENHVLVFDIAKRNIGNAYHPHTGIFRVPE
AGVYVFTWNLPNGGVPSYHTLQLVINSEVWGAVHAHSVANSEFIESTGVAVVQANAGDDVFVRSAALSYNGVIVSNKFAK
TFFAGWKL

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