Gene
| Gene Model ID | pfu_aug2.0_47.1_23328 |
|---|---|
| Locus | scaffold47.1 : 281572 ... 310962 : - |
| To GenomeBrowser | scaffold47.1:281572..310962 |
| Genes list of scaffold | scaffold47.1 |
| Synonym | pfu_aug1.0_10775.1_53589 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_47.1_23328.t1 | 1 | 1 | CH | 470 | 571 | 1.3e-17 | 63.7 | 1.0e-20 | 5.1e-17 | 61.8 |
| pfu_aug2.0_47.1_23328.t1 | 2 | 1 | CAMSAP_CH | 484 | 544 | 4.0e-09 | 35.9 | 1.4e-11 | 6.8e-08 | 32.0 |
| pfu_aug2.0_47.1_23328.t1 | 2 | 2 | CAMSAP_CH | 894 | 931 | 4.0e-09 | 35.9 | 0.1 | 500.0 | 0.4 |
| pfu_aug2.0_47.1_23328.t1 | 2 | 1 | DUF3585 | 933 | 938 | 8.4e-36 | 122.9 | 3.0 | 15000.0 | -8.4 |
| pfu_aug2.0_47.1_23328.t1 | 2 | 2 | DUF3585 | 1958 | 2088 | 8.4e-36 | 122.9 | 1.7e-39 | 8.4e-36 | 122.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_47.1_23328.t1 | gi|524885864|ref|XP_005099535.1| | PREDICTED: protein-methionine sulfoxide oxidase mical3a-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_47.1_23328.t1 | gi|676426532|ref|XP_009044654.1| | hypothetical protein LOTGIDRAFT_51710, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_47.1_23328.t1 | gi|743699228|ref|XP_010962377.1| | PREDICTED: protein-methionine sulfoxide oxidase MICAL3 isoform X10 [Camelus bactrianus] | 0.0 |
| pfu_aug2.0_47.1_23328.t1 | gi|743699222|ref|XP_010962355.1| | PREDICTED: protein-methionine sulfoxide oxidase MICAL3 isoform X7 [Camelus bactrianus] | 0.0 |
| pfu_aug2.0_47.1_23328.t1 | gi|743699224|ref|XP_010962362.1| | PREDICTED: protein-methionine sulfoxide oxidase MICAL3 isoform X8 [Camelus bactrianus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_47.1_23328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23328.t1 atggattatcataatggaaatgaggaagatgctgattcattatttgataatttcctaaaagccagtacttgtaaatccat actacataccttccatcaattatgtgatgaaattggtctgaaacacactcaccatcatcacttctaccgtcatctgagct cgcgacttacatcatggaaagcacagtggttatgggcaaagctaaacaagagacagtccttaaaggagtacagaagggga gaggcttgtcgcaatacaagggtgctggttataggagggggaccatgtggtttacgggtggcaatagaagcggctttcct tggatgtataaggcagctacagtgtatcttgatgaaggtggccctgattgtgggggtggagatccacgtcaatgtggcct tcgagggactcagggaaccacctgctgatcagatggaagatcataagataggatggcgttgtaactgtgacccaccagac cacgttgtgtcggaatatgagttcgatgtacttattggtgctgacggtaaaaggaacacccttcaaggattcaaaaggaa ggaatttcgtggaaaactcgctatagctattactgccaatttcataaatcgtaatacacaggaagaggcaagagtggaag aaattagcggtgtggccttcatattcaatcagaaattcttcaaggatttaaacaaagagactggaatcgacctcgaaaat atagtgtactacaaagatgacactcattactttgttatgacagcaaagaaaagtagtttactagataaaggagtgctgct ggtagatcatgcagacacggctaaattactggcttcagacaatgtagatcgtaatgcgttactcgagtatgcaaaagaag ctgccgatttctcgacggatcatcagcttcctaacttggagtacgctataaatcactaccgtcagcaggatgtagccatg tttgatttcacctccatgtttcaggctattaacgcatcgagagtgatagaacggaacgatcataggttgttgatgggttt agtaggagatagtctcatcgagcctttttggcccactgggtcaggttgtgcccggggcttccttggggcctttgacatgg catggatgatcaggagctgggcttcaggaaagatgactccgctccaggttgtagcagagagagaaagtatttatcaactc ctctctcaaactacaccagaaaacatcagtaaaaacttcaatgaatattccatagaccccaatacaaggtatccaaacct gaatgccaagttactgaaggcagatcaggtgcgtcacttgtatgactgtggtgacatcacgtatacagatgaaatactcg ataacccatccaagaaattcaggggagaagagatcattgacagttatagtttactacactggtgccaacgtgttctaaac cataagtacagaaatgttcatataatagacttcacaagttcctggaggagtggactagccctttgtgcccttatacatgc cttcaagccaagccttatagacctaaattcactgaactctctagaaattgcccagaataaccagctagcctttgatgtag cccagcgggagcttggtatcagtccccccatggcaggggtcgagatggaggggtgtgacactccagataaactcacaatg gtctcctatctatcacagttctacgataaattcaggagggaacacaacccaagcattgagtcacctcatcgggatgtaca caagagtcacaagtcaccattacatcgtacactcttacagaaaatcaggaactctgccaagtttactcgttcaaagaaga agaaagaggaagataaaaatgagtataatgtttcattgagtaaacgcaaacatgaacaaaatgacatcaaccagaatggg gatgtcagattgacgaaatacaacaaacttccaatggatgagattgctacaaagctaacggtggacaacatgaaaaaaga cgtcgccaagacaaccagtgaccctcagccacaggtcaacgtcagtgcaatggctgaaatactgacctctaagtttaaag gtcttaatcaacaacctgcaccatctgctgctaaggctaaggcaagatccactggtgtattgctggcagcacaacctgag agtgagatatgttacttctgtaagaagagagtgtacataatggagagaatgacagcagagaatgtgttcttccatcgagt tacattttactgcttccgccactctcgaccggagatgagacttggaaggtctaggaggaaaagagcatatctagatgatg aagaaaattcaaaggagaatattcccaagcttgtggtcgatgctagtcagtcacctaaactgtctccacggaaagatgga tctcccaggaaaataccagctcctttaagtccaccactccagcctgaagtggatttgtccaaaccaaagaggacgccgga gcgtatagagtttgagaacagtattgacggcatgcctgaggtggatccagaggaggaattgttggaacataatctgcgag catctatttctgctgacggtatccttggtaacgactacgagcaggacgacatggattctgactctgagtcaagtgatgac gaggagctccaagaagctgtagaatctacgtacggtcacaatgtaagtaaagatctgacgatagaggaggccctggcagt ggtcaaaacactgaaacgacgatctcacgagaatctgatagaagctgtagagatggaggatgaagagatggacgatgagg aggtagaggaggaggaagatgaagatgatgaggaagatgaagaatctgacaatgaagatgaaacttctgatacggaggat gctgatgtagagaaagccagcccagatctgtcacttaatctgccatccaatgacaaccaaacaatcaaagcccagaaaaa cgcacggttaaacttcttcactactcctccagaacccgtacgattagatccctttaagatgtttggaatggggaagaaag ctgaggagaaaaaagtggaggaaactacagatggggctgtgaacaataatgtcgtgaagaaggatatgcatgaagaggca gagatgatggtagaagaagatgtccaggaggaaggattaaaaccagagaataaaattgaagtttctacaactattgagaa gaaaactgagagtgaaaaagaattggatgatgaagaggatgatgttttcgaggacgatgacgacaaagttgctatgagca tacagatggagagaattttagcagacattgagcataagtcatctgtcagtgataatggagaaaataatcgatcctcaact tctgacgcccttgatgttaagtcctcaaccagcgaggtaggggaacgatcgtcttcctctagtgaagtggagctgtcaga tagtgaggaaggcctgggggagggtaaagatggggagggaacaaaggagtatatagggagtggggaaacagagagagcag tgctacaaagtgtccaggaaatgaggtcttcctccagcacttcagaatctagtcattcagcacatcaggctgtcttatcc agtattgaacgtatggaagagccagggaatcaggaaatagaaagagaattcaacagcattgatgacagatttgtcactaa aggacgaggttcttcccgcaaacagaaacaaaaacgagttcacagaaattcctttggatctgattctagttttaccatat ctacgccaagtgaatcactgagatcgtccctgagctctctggtagagaatatacaggcagcagacgatgctgcagacaaa cctgatccagattttattaaggattattgtttgactctaagtcaggtgctagacgaagaggtggacgaggaaattgttcc ccctggctctgaggatgggccgagaaggggtagttccctcgggtctgaggacacacccagaccggaggtcagtcctctag atgacacgttggtgggtgaggaggaaacattgacctccccaagaaggggacgtaagagcagtagtatgtatgtcacaccc aatcaaagtgtgagtgaggaaaggtttcactccatcagtgatgttgaacaagatctgatggagtccaaagtgggcatttc acaaagtgcaatagattctgaacaaaatgacagacaaagctgtgatagtgatatgaggacagatgtattaccgaatgcca gtagtgaggatgctaggtctcaaaatagcgaaattgaaatcgacagtgaaataacgacaaacgacacaatgtcgggctct atggacaccaagtacaacagtgatggtagtacttggcgtcctttacctccgttaccgaaagaagcacttgataaagttaa aaaagacaagtcttccaagaagaaaaagttaccagtaatttctgataagcaggaaagtggtagaaaattacctgatatta gtaacctcaagagtaagaattcatcaggatttcagagtaattttatgaagcaacacttaggatcaccgactggaacagac agtagtgaaaaggacgggtcaggtagtccggaagtgataaaaaagggtaataaaggtgggggtaaatcagaggctaataa aaagaagaaaatctcagtggaccatgctaagttaaggtcagtcaatagtgtagataatgatacatgtagttctagtcaaa acgagagcattccagggatgaaaaaaattagggtagatactcagttgagagagagagtgaaggctgagcctgtaaaaact ccaattagtgccagtcatcatattgatgatataccttttgctgatgacagcgaagatgacatgttacaggagttcaaaac gcctgcgacatcagtcaaaactaaaccaccaagggaggaaaacatgggtaaagatgtcaggaaaaggattttacccttac ctcccaaatcagaaacaagtaagaaaaagtcgagtgcaattcagggaaatgcaggtccagatactattcgacagaaaact aaagccaatattgaaagtgcgagagaaattgctcgtgaaaaggctcgtctcaaaagtgatgaagaattaggattgatgaa catgggatacactcctcgcaaaaattacaagacaagtacgtcgtgtacaccaagtacaagtgatttccccacagacagtg atgatgctgaaaagatccttcattctacaccaatcgtggataaaactgagttaccaccagtatcagggaagtcaagtaag ggaaagaaaaagaagaagcaggacaaagatcgggatagtacgcctagggcatcagataaatctgatactgaccttaacaa tagtaaatcagccaccaagaaaaagaaaaaattctccctcttcccacctaaaaagtcaccggagaagaactctaaaggtc tgaaagacaatcgttcttcatctaatgacacgctagaagagaagtctccaaagaagaaaaagaaaactccaaaatcagat aagaagaagaagcacatgtcagagtcggccctggaacatttagacaaaggtttaagtgaactgaatttgcatggtgtgac tcctcgattcactggcgatccacatgacaagcattcattaaaacggcggcctggatttgcagtacggagaactatgcctc ctaaagctaacttggatgaattttctgattctgacgagagccattatgaaggtcaccttgacacacttacacggagacat ggaaaggaaagaagaacaatgtctgaggatgagcttaacatgagaatcgcaaaacgagttcagtctgcggcacgcaaaca gatgaaacaacgagaacaaaaacgactcaggatggcgcaggaaatacaacgacagctggaagaggtggatgtaaagcaga gagatctggaagaaaaaggtgtcattgtggaaaaagccctgcgtggtgaagggccagatgctgatagggaggaggcagag ctgatgcaggaatggttccaacttgtttatgagaaaaacgcactggtgcgatacgaatccgagttaatggtcaatgctca gtatatggagttggaggatagacatggccgacttgaacaagccctcagggaaaaaatggctgtcacaggtttggataaaa cagcccaacaagctgccgaggaaaaacgtgtattagatgaattattggaggtagtggaagagagaaataaactggtcgct atgttagaggaagatagagtcaggctatggaagcagacacagcgagaggcttacatgaatcccccttgttccacgtaa |
|
Protein
| Protein ID | pfu_aug2.0_47.1_23328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_47.1_23328.t1 MDYHNGNEEDADSLFDNFLKASTCKSILHTFHQLCDEIGLKHTHHHHFYRHLSSRLTSWKAQWLWAKLNKRQSLKEYRRG EACRNTRVLVIGGGPCGLRVAIEAAFLGCIRQLQCILMKVALIVGVEIHVNVAFEGLREPPADQMEDHKIGWRCNCDPPD HVVSEYEFDVLIGADGKRNTLQGFKRKEFRGKLAIAITANFINRNTQEEARVEEISGVAFIFNQKFFKDLNKETGIDLEN IVYYKDDTHYFVMTAKKSSLLDKGVLLVDHADTAKLLASDNVDRNALLEYAKEAADFSTDHQLPNLEYAINHYRQQDVAM FDFTSMFQAINASRVIERNDHRLLMGLVGDSLIEPFWPTGSGCARGFLGAFDMAWMIRSWASGKMTPLQVVAERESIYQL LSQTTPENISKNFNEYSIDPNTRYPNLNAKLLKADQVRHLYDCGDITYTDEILDNPSKKFRGEEIIDSYSLLHWCQRVLN HKYRNVHIIDFTSSWRSGLALCALIHAFKPSLIDLNSLNSLEIAQNNQLAFDVAQRELGISPPMAGVEMEGCDTPDKLTM VSYLSQFYDKFRREHNPSIESPHRDVHKSHKSPLHRTLLQKIRNSAKFTRSKKKKEEDKNEYNVSLSKRKHEQNDINQNG DVRLTKYNKLPMDEIATKLTVDNMKKDVAKTTSDPQPQVNVSAMAEILTSKFKGLNQQPAPSAAKAKARSTGVLLAAQPE SEICYFCKKRVYIMERMTAENVFFHRVTFYCFRHSRPEMRLGRSRRKRAYLDDEENSKENIPKLVVDASQSPKLSPRKDG SPRKIPAPLSPPLQPEVDLSKPKRTPERIEFENSIDGMPEVDPEEELLEHNLRASISADGILGNDYEQDDMDSDSESSDD EELQEAVESTYGHNVSKDLTIEEALAVVKTLKRRSHENLIEAVEMEDEEMDDEEVEEEEDEDDEEDEESDNEDETSDTED ADVEKASPDLSLNLPSNDNQTIKAQKNARLNFFTTPPEPVRLDPFKMFGMGKKAEEKKVEETTDGAVNNNVVKKDMHEEA EMMVEEDVQEEGLKPENKIEVSTTIEKKTESEKELDDEEDDVFEDDDDKVAMSIQMERILADIEHKSSVSDNGENNRSST SDALDVKSSTSEVGERSSSSSEVELSDSEEGLGEGKDGEGTKEYIGSGETERAVLQSVQEMRSSSSTSESSHSAHQAVLS SIERMEEPGNQEIEREFNSIDDRFVTKGRGSSRKQKQKRVHRNSFGSDSSFTISTPSESLRSSLSSLVENIQAADDAADK PDPDFIKDYCLTLSQVLDEEVDEEIVPPGSEDGPRRGSSLGSEDTPRPEVSPLDDTLVGEEETLTSPRRGRKSSSMYVTP NQSVSEERFHSISDVEQDLMESKVGISQSAIDSEQNDRQSCDSDMRTDVLPNASSEDARSQNSEIEIDSEITTNDTMSGS MDTKYNSDGSTWRPLPPLPKEALDKVKKDKSSKKKKLPVISDKQESGRKLPDISNLKSKNSSGFQSNFMKQHLGSPTGTD SSEKDGSGSPEVIKKGNKGGGKSEANKKKKISVDHAKLRSVNSVDNDTCSSSQNESIPGMKKIRVDTQLRERVKAEPVKT PISASHHIDDIPFADDSEDDMLQEFKTPATSVKTKPPREENMGKDVRKRILPLPPKSETSKKKSSAIQGNAGPDTIRQKT KANIESAREIAREKARLKSDEELGLMNMGYTPRKNYKTSTSCTPSTSDFPTDSDDAEKILHSTPIVDKTELPPVSGKSSK GKKKKKQDKDRDSTPRASDKSDTDLNNSKSATKKKKKFSLFPPKKSPEKNSKGLKDNRSSSNDTLEEKSPKKKKKTPKSD KKKKHMSESALEHLDKGLSELNLHGVTPRFTGDPHDKHSLKRRPGFAVRRTMPPKANLDEFSDSDESHYEGHLDTLTRRH GKERRTMSEDELNMRIAKRVQSAARKQMKQREQKRLRMAQEIQRQLEEVDVKQRDLEEKGVIVEKALRGEGPDADREEAE LMQEWFQLVYEKNALVRYESELMVNAQYMELEDRHGRLEQALREKMAVTGLDKTAQQAAEEKRVLDELLEVVEERNKLVA MLEEDRVRLWKQTQREAYMNPPCST |
|