Gene
| Gene Model ID | pfu_aug2.0_470.1_00782 |
|---|---|
| Locus | scaffold470.1 : 4687 ... 41710 : + |
| To GenomeBrowser | scaffold470.1:4687..41710 |
| Genes list of scaffold | scaffold470.1 |
| Synonym | pfu_aug1.0_4932.1_38021 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dynamin isoform x6 | GO:0003924 GO:0005525 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_470.1_00782.t2 | 1 | 1 | Dynamin_N | 35 | 208 | 0.0 | 186.5 | 0.0 | 0.0 | 185.1 |
| pfu_aug2.0_470.1_00782.t2 | 2 | 1 | Dynamin_M | 217 | 509 | 0.0 | 337.6 | 0.0 | 0.0 | 337.6 |
| pfu_aug2.0_470.1_00782.t2 | 1 | 1 | PH | 516 | 613 | 4.6e-10 | 39.6 | 4.2e-13 | 1.0e-09 | 38.4 |
| pfu_aug2.0_470.1_00782.t2 | 1 | 1 | GED | 643 | 732 | 9.7e-23 | 79.8 | 1.0e-25 | 2.6e-22 | 78.5 |
| pfu_aug2.0_470.1_00782.t2 | 2 | 2 | Dynamin_M | 655 | 667 | 0.0 | 337.6 | 1.5 | 3700.0 | -3.6 |
Transcript
| Transcript ID | pfu_aug2.0_470.1_00782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00782.t1 atgtcggggaacgcaggaatggagcagcttattcctattgtgaataagctgcaagatgcatttgcttccctgggattacc actatctttagatctaccacaaatcgccgtcgttggaagtcaaagtgctggcaaaagttcggtattggaaaattttgtag gaagagatttccttcctcgaggttcgggtattgtcaccaggagacccctggttctacagctaatcaactcacactcagag tatgctgaatttttacacaagaagggttcatacctccaagattttgatgccgtcaggaaagagattgagaatgaaacaga tcgagttacaggaagtaacaagggaatctccaatattcccattaatctacgggtctactctcctcatgtgctgaatctga cattaatagatttaccgggtatgaccaaggtccctgtgggtgaccagccggtagatatcgagacacaaatccgttccatg ttgatggaatttatcaccaaggacagttgtcttatcttggcagtatcccccgcaaactcagatctggccaactctgatgc tctcaaaatagcaaaagaagtagatccacaaggtacaagaacaataggtgtgatcaccaaactggacctgatggacgagg gtactgatgccagggatatattggaaaataaaaccctaccacttagacgaggatatattggtgtagttaacagaagtcag aaagatatagagggcaggaaggatatacgagcggctttagctgccgagaggaaattcttcctaagtcatccatcttacag gcacatggcagacagaatgggcactccttttctacaaagaattttaaatcagcaactgaccaatcacattcgagatactt taccaaccctaagaaataagttacagtcacaactattggctctagaaaaagatgtagaggaatacaaaaatttcagaccg gatgatccagctcgcaaaaccaaggccatgatgcaaatgatccagcagttcaatgtggattttgacaaagccatagaagg tgctgggtcagagatcagcacaaaggaactatcgggaggagctaaaattaacagaatattccacgaaagattcccttttg aattagtcaagatggaatttgatgagagagagctgaggagagaaattcgctatgctattaggaatattcgtggtatcagg tcgggtcttttcacacctgacatggcatttgaggcaatagtcaagaaacagattgataaactcaaagggccgtcattaaa agctgtagaccttgtcgttacggaactcacaaatgtcgtcagaacctgtacagataagatgaacaggtaccctcggctcc gagaggaggtagagaggatcgttaatacacgtgtacgtgagagagaatccaaggccaaggatcagttactattattagtg gaattccagttatcatacatgaatacaaatcacgaggattttataggatttgcaaatgcccaaaacaagacagagaatag tcaaaggaaaaaagttggaaatcaggtgataaggaaaggttggctcaacctccataacatcagcttcattaaaggaggat ctaaggatttctggtttgtcctcactgcagaaacactgtcttggttcaaagatgaagaggaaaaagaaaagaaattcatg ctgccacttgatggcctcaaaataaaagacttggaaagcggtatattcactaaacactgttttgcattgttcaatcccga atcgagtcttgccaaacagagaaatgtatacaaggattataaacagctagaactgtcagcagaaagtcaggaggatgttg acagctggaaagcttcattcctgagggcaggggtgtacccagacagaggggatgatccgggagaaaaggcaaaggatgag aatgtgtctatggaccctcaactggaaagacaagtggagacaatacgtaaccttgtggactcctacatgaaaattgtcaa caaaacgcagcgtgatctagtcccaaaaaccatcatgttcctcatcgtcaatgatttgaaagaattcatcggagcagaat tgcttgcacaattatattcatctgtagaccagagcactgtgatggaggaatcaccggaggaagctcaacgacgagaggac atcctccgtatgtatcatgtgaccaaggaggccctgtcaattattggtgatgtttccatgacgacagtgtctaccccggt accacccccggtagacgacgagtggctcaaagtagatcaatcgtcacataatggctatcatggcggtccaaggaaatatg atgttcatgttgacaagaagaccgctcaaaaaagctggaatgtgggtcagtccatagggaatgcttatatgcgcaatcgt cctggtggcagcggagggggatctggcaacatgccaaaaatcccagacagaccatcaatcccatcaaggccaaacaatgt attcaactga |
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| Transcript ID | pfu_aug2.0_470.1_00782.t2 |
| Definition | - |
>pfu_aug2.0_470.1_00782.t2 atgtcggggaacgcaggaatggagcagcttattcctattgtgaataagctgcaagatgcatttgcttccctgggattacc actatctttagatctaccacaaatcgccgtcgttggaagtcaaagtgctggcaaaagttcggtattggaaaattttgtag gaagagatttccttcctcgaggttcgggtattgtcaccaggagacccctggttctacagctaatcaactcacactcagag tatgctgaatttttacacaagaagggttcatacctccaagattttgatgccgtcaggaaagagattgagaatgaaacaga tcgagttacaggaagtaacaagggaatctccaatattcccattaatctacgggtctactctcctcatgtgctgaatctga cattaatagatttaccgggtatgaccaaggtccctgtgggtgaccagccggtagatatcgagacacaaatccgttccatg ttgatggaatttatcaccaaggacagttgtcttatcttggcagtatcccccgcaaactcagatctggccaactctgatgc tctcaaaatagcaaaagaagtagatccacaaggtacaagaacaataggtgtgatcaccaaactggacctgatggacgagg gtactgatgccagggatatattggaaaataaaaccctaccacttagacgaggatatattggtgtagttaacagaagtcag aaagatatagagggcaggaaggatatacgagcggctttagctgccgagaggaaattcttcctaagtcatccatcttacag gcacatggcagacagaatgggcactccttttctacaaagaattttaaatcagcaactgaccaatcacattcgagatactt taccaaccctaagaaataagttacagtcacaactattggctctagaaaaagatgtagaggaatacaaaaatttcagaccg gatgatccagctcgcaaaaccaaggccatgatgcaaatgatccagcagttcaatgtggattttgacaaagccatagaagg tgctgggtcagagatcagcacaaaggaactatcgggaggagctaaaattaacagaatattccacgaaagattcccttttg aattagtcaagatggaatttgatgagagagagctgaggagagaaattcgctatgctattaggaatattcgtggtatcagg tcgggtcttttcacacctgacatggcatttgaggcaatagtcaagaaacagattgataaactcaaagggccgtcattaaa agctgtagaccttgtcgttacggaactcacaaatgtcgtcagaacctgtacagataagatgaacaggtaccctcggctcc gagaggaggtagagaggatcgttaatacacgtgtacgtgagagagaatccaaggccaaggatcagttactattattagtg gaattccagttatcatacatgaatacaaatcacgaggattttataggatttgcaaatgcccaaaacaagacagagaatag tcaaaggaaaaaagttggaaatcaggtgataaggaaaggttggctcaacctccataacatcagcttcattaaaggaggat ctaaggatttctggtttgtcctcactgcagaaacactgtcttggttcaaagatgaagaggaaaaagaaaagaaattcatg ctgccacttgatggcctcaaaataaaagacttggaaagcggtatattcactaaacactgttttgcattgttcaatcccga atcgagaaatgtatacaaggattataaacagctagaactgtcagcagaaagtcaggaggatgttgacagctggaaagctt cattcctgagggcaggggtgtacccagacagaggggatgatccgggagaaaaggcaaaggatgagaatgtgtctatggac cctcaactggaaagacaagtggagacaatacgtaaccttgtggactcctacatgaaaattgtcaacaaaacgcagcgtga tctagtcccaaaaaccatcatgttcctcatcgtcaatgatttgaaagaattcatcggagcagaattgcttgcacaattat attcatctgtagaccagagcactgtgatggaggaatcaccggaggaagctcaacgacgagaggacatcctccgtatgtat catgtgaccaaggaggccctgtcaattattggtgatgtttccatgacgacagtgtctaccccggtaccacccccggtaga cgacgagtggctcaaagtagatcaatcgtcacataatggctatcatggcggtccaaggaaatatgatgttcatgttgaca agaagaccgctcaaaaaagctggaatgtgggtcagtccatagggaatgcttatatgcgcaatcgtcctggtggcagcgga gggggatctggcaacatgccaaaaatcccagacagaccatcaatcccatcaaggccaaacaatgtattcaactga |
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Protein
| Protein ID | pfu_aug2.0_470.1_00782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00782.t1 MSGNAGMEQLIPIVNKLQDAFASLGLPLSLDLPQIAVVGSQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLINSHSE YAEFLHKKGSYLQDFDAVRKEIENETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGMTKVPVGDQPVDIETQIRSM LMEFITKDSCLILAVSPANSDLANSDALKIAKEVDPQGTRTIGVITKLDLMDEGTDARDILENKTLPLRRGYIGVVNRSQ KDIEGRKDIRAALAAERKFFLSHPSYRHMADRMGTPFLQRILNQQLTNHIRDTLPTLRNKLQSQLLALEKDVEEYKNFRP DDPARKTKAMMQMIQQFNVDFDKAIEGAGSEISTKELSGGAKINRIFHERFPFELVKMEFDERELRREIRYAIRNIRGIR SGLFTPDMAFEAIVKKQIDKLKGPSLKAVDLVVTELTNVVRTCTDKMNRYPRLREEVERIVNTRVRERESKAKDQLLLLV EFQLSYMNTNHEDFIGFANAQNKTENSQRKKVGNQVIRKGWLNLHNISFIKGGSKDFWFVLTAETLSWFKDEEEKEKKFM LPLDGLKIKDLESGIFTKHCFALFNPESSLAKQRNVYKDYKQLELSAESQEDVDSWKASFLRAGVYPDRGDDPGEKAKDE NVSMDPQLERQVETIRNLVDSYMKIVNKTQRDLVPKTIMFLIVNDLKEFIGAELLAQLYSSVDQSTVMEESPEEAQRRED ILRMYHVTKEALSIIGDVSMTTVSTPVPPPVDDEWLKVDQSSHNGYHGGPRKYDVHVDKKTAQKSWNVGQSIGNAYMRNR PGGSGGGSGNMPKIPDRPSIPSRPNNVFN |
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| Protein ID | pfu_aug2.0_470.1_00782.t2 |
| Definition | - |
>pfu_aug2.0_470.1_00782.t2 MSGNAGMEQLIPIVNKLQDAFASLGLPLSLDLPQIAVVGSQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLINSHSE YAEFLHKKGSYLQDFDAVRKEIENETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGMTKVPVGDQPVDIETQIRSM LMEFITKDSCLILAVSPANSDLANSDALKIAKEVDPQGTRTIGVITKLDLMDEGTDARDILENKTLPLRRGYIGVVNRSQ KDIEGRKDIRAALAAERKFFLSHPSYRHMADRMGTPFLQRILNQQLTNHIRDTLPTLRNKLQSQLLALEKDVEEYKNFRP DDPARKTKAMMQMIQQFNVDFDKAIEGAGSEISTKELSGGAKINRIFHERFPFELVKMEFDERELRREIRYAIRNIRGIR SGLFTPDMAFEAIVKKQIDKLKGPSLKAVDLVVTELTNVVRTCTDKMNRYPRLREEVERIVNTRVRERESKAKDQLLLLV EFQLSYMNTNHEDFIGFANAQNKTENSQRKKVGNQVIRKGWLNLHNISFIKGGSKDFWFVLTAETLSWFKDEEEKEKKFM LPLDGLKIKDLESGIFTKHCFALFNPESRNVYKDYKQLELSAESQEDVDSWKASFLRAGVYPDRGDDPGEKAKDENVSMD PQLERQVETIRNLVDSYMKIVNKTQRDLVPKTIMFLIVNDLKEFIGAELLAQLYSSVDQSTVMEESPEEAQRREDILRMY HVTKEALSIIGDVSMTTVSTPVPPPVDDEWLKVDQSSHNGYHGGPRKYDVHVDKKTAQKSWNVGQSIGNAYMRNRPGGSG GGSGNMPKIPDRPSIPSRPNNVFN |
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