Gene
| Gene Model ID | pfu_aug2.0_470.1_00785 |
|---|---|
| Locus | scaffold470.1 : 103188 ... 105315 : - |
| To GenomeBrowser | scaffold470.1:103188..105315 |
| Genes list of scaffold | scaffold470.1 |
| Synonym | pfu_aug1.0_678.1_36650 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_470.1_00785.t1 | 1 | 1 | C1q | 30 | 156 | 8.3e-22 | 77.5 | 3.5e-25 | 1.0e-21 | 77.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_470.1_00785.t1 | gi|71834430|ref|NP_001025310.1| | uncharacterized protein LOC560421 [Danio rerio] | 3.0e-10 |
| pfu_aug2.0_470.1_00785.t1 | gi|92097199|gb|AAI15049.1| | Si:rp71-1g18.11 protein [Danio rerio] | 3.0e-10 |
| pfu_aug2.0_470.1_00785.t1 | gi|554886033|ref|XP_005952613.1| | PREDICTED: collagen alpha-1(VIII) chain-like [Haplochromis burtoni] | 4.0e-10 |
| pfu_aug2.0_470.1_00785.t1 | gi|573881792|ref|XP_006629087.1| | PREDICTED: caprin-2-like [Lepisosteus oculatus] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_470.1_00785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00785.t1 atgtttcgtatagaaataattgtgatgctgacagtgatggccgtaacaatcaggggacagatatgtagtaatcaagagaa agtttacttccaagcttggaattctgcaactatgaagaacatcaaaagtggtcatgtcttcgtcttcgatagaacaaaca caaaccatggaaatcactatgacagttccaaggggaactttaaagctcctagagacggcccgtacgtctttacatggacc gtcgtaacccaggacaaatacagtataaacgttgaactgttccggaatggcaaaagagtaagtcttgcacaagcagatgg tcagcccggaccacaaaatagttccggatccaacacggttgtgctggatcttaagacaggtgacgtggtgaatcttagat gtggtggttggatgaaccaggatcagcgacagcttgttggtgatacacactctacattttccggatgggcactatga |
|
Protein
| Protein ID | pfu_aug2.0_470.1_00785.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00785.t1 MFRIEIIVMLTVMAVTIRGQICSNQEKVYFQAWNSATMKNIKSGHVFVFDRTNTNHGNHYDSSKGNFKAPRDGPYVFTWT VVTQDKYSINVELFRNGKRVSLAQADGQPGPQNSSGSNTVVLDLKTGDVVNLRCGGWMNQDQRQLVGDTHSTFSGWAL |
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