Gene
| Gene Model ID | pfu_aug2.0_470.1_00792 |
|---|---|
| Locus | scaffold470.1 : 213141 ... 217542 : + |
| To GenomeBrowser | scaffold470.1:213141..217542 |
| Genes list of scaffold | scaffold470.1 |
| Synonym | pfu_aug1.0_24481.1_11623 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_470.1_00792.t1 | 1 | 1 | zf-B_box | 10 | 45 | 6.1e-09 | 35.6 | 6.6e-12 | 9.7e-09 | 34.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_470.1_00792.t1 | gi|347967663|ref|XP_312621.4| | AGAP002344-PA [Anopheles gambiae str. PEST] | 2.0e-06 |
| pfu_aug2.0_470.1_00792.t1 | gi|118354826|ref|XP_001010674.1| | 4.0e-06 | |
| pfu_aug2.0_470.1_00792.t1 | gi|170030554|ref|XP_001843153.1| | B-box type zinc-finger protein ncl-1 [Culex quinquefasciatus] | 5.0e-06 |
| pfu_aug2.0_470.1_00792.t1 | gi|260817447|ref|XP_002603598.1| | hypothetical protein BRAFLDRAFT_93142 [Branchiostoma floridae] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_470.1_00792.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00792.t1 atggcaacaaccgagctccaatcagctgtaccaatgtgtgaacatcataccgaggaggaattggactactactgcttcac gtgcaaattgaggatttgtgaggaatgttgtcgtggtgagcacaaggatcacaactggaggagatcaaagaaagccgcaa gagaaatcagggaaaactcacgtgctagatgtgagaaaatagaaggcatgatcagtggactggaaaatgacaatgaggat agagagatagaggccgatatagagagaatagataagttaaagatggagtttatatccttcatagatgacatggcggaaga gatgaaggcaaagaggaggggacaaaagtcacaaaggaacttgacaaaagaactagagaaactgaggaaaatgctcaact tctacaagaatgaggtcaaattaggtatgaccaaatgtataattaatgtatggttaactattctatttcataaataa |
|
Protein
| Protein ID | pfu_aug2.0_470.1_00792.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_470.1_00792.t1 MATTELQSAVPMCEHHTEEELDYYCFTCKLRICEECCRGEHKDHNWRRSKKAAREIRENSRARCEKIEGMISGLENDNED REIEADIERIDKLKMEFISFIDDMAEEMKAKRRGQKSQRNLTKELEKLRKMLNFYKNEVKLGMTKCIINVWLTILFHK |
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