Gene
| Gene Model ID | pfu_aug2.0_471.1_04220 |
|---|---|
| Locus | scaffold471.1 : 6916 ... 31610 : + |
| To GenomeBrowser | scaffold471.1:6916..31610 |
| Genes list of scaffold | scaffold471.1 |
| Synonym | pfu_aug1.0_11276.1_24864 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| plastin-2 isoform x2 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_471.1_04220.t1 | 2 | 1 | EF-hand_1 | 16 | 42 | 2.5e-10 | 38.8 | 5.9e-09 | 8.0e-06 | 24.8 |
| pfu_aug2.0_471.1_04220.t1 | 3 | 1 | EF-hand_6 | 16 | 42 | 1.7e-09 | 36.7 | 3.5e-08 | 4.8e-05 | 22.9 |
| pfu_aug2.0_471.1_04220.t1 | 2 | 1 | EF-hand_7 | 17 | 78 | 9.1e-11 | 41.7 | 3.4e-13 | 4.6e-10 | 39.4 |
| pfu_aug2.0_471.1_04220.t1 | 2 | 1 | EF-hand_5 | 17 | 39 | 1.5e-06 | 27.2 | 3.0e-06 | 0.004 | 16.4 |
| pfu_aug2.0_471.1_04220.t1 | 3 | 2 | EF-hand_6 | 58 | 79 | 1.7e-09 | 36.7 | 0.0004 | 0.53 | 10.3 |
| pfu_aug2.0_471.1_04220.t1 | 2 | 2 | EF-hand_1 | 65 | 80 | 2.5e-10 | 38.8 | 0.00017 | 0.22 | 10.8 |
| pfu_aug2.0_471.1_04220.t1 | 2 | 2 | EF-hand_5 | 65 | 76 | 1.5e-06 | 27.2 | 0.0014 | 1.9 | 7.9 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 1 | CH | 124 | 234 | 0.0 | 252.1 | 1.3e-24 | 1.8e-21 | 76.1 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 1 | CAMSAP_CH | 148 | 217 | 6.0e-10 | 38.6 | 5.4e-09 | 7.2e-06 | 25.5 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 2 | CH | 267 | 369 | 0.0 | 252.1 | 1.4e-20 | 1.9e-17 | 63.2 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 2 | CAMSAP_CH | 285 | 303 | 6.0e-10 | 38.6 | 1.8 | 2400.0 | -1.8 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 3 | CH | 389 | 493 | 0.0 | 252.1 | 1.4e-19 | 1.9e-16 | 60.0 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 3 | CAMSAP_CH | 400 | 437 | 6.0e-10 | 38.6 | 0.018 | 24.0 | 4.6 |
| pfu_aug2.0_471.1_04220.t1 | 3 | 3 | EF-hand_6 | 418 | 424 | 1.7e-09 | 36.7 | 6.9 | 9300.0 | -3.0 |
| pfu_aug2.0_471.1_04220.t1 | 2 | 2 | EF-hand_7 | 503 | 558 | 9.1e-11 | 41.7 | 1.3 | 1800.0 | -0.9 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 4 | CH | 512 | 611 | 0.0 | 252.1 | 5.3e-16 | 7.1e-13 | 48.5 |
| pfu_aug2.0_471.1_04220.t1 | 4 | 4 | CAMSAP_CH | 536 | 597 | 6.0e-10 | 38.6 | 0.04 | 54.0 | 3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_471.1_04220.t1 | gi|675847274|ref|XP_009009197.1| | hypothetical protein HELRODRAFT_105374 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_471.1_04220.t1 | gi|347971179|ref|XP_309626.4| | AGAP004071-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_471.1_04220.t1 | gi|157167757|ref|XP_001655615.1| | AAEL002539-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_471.1_04220.t1 | gi|347971183|ref|XP_003436706.1| | AGAP004071-PB [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_471.1_04220.t1 | gi|751236587|ref|XP_011172135.1| | PREDICTED: plastin-2 isoform X2 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_471.1_04220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04220.t1 atgtcgtctcgtgtatctcaggagttatctcaggatgccctagatgaattacaacaagcattccagacgattgatgttga cagcaatggatatattgaagctgatgagctgcaggaggcgttacagcttgctggctgtaaaattgctgcctatcaagcca gggttataatgcaacagtatgacacaaagcataaggatggcaaactggaatttgatgaattcagggcgatttattctgac ctccaaaacaaagaggtagccaggacttttaagaaagcagtgacagcacgtaagggtgttgaagtccatggaggtacgag cgaggcgtcagtagagggcaccacacacactgtccgtgatgaggaaagcaagtccttcactgaatggataaacaagactt tggaagctgatgatgactgcaaggcatatctgccaatgagacctgatagcaatgatttgtatgagaaaataaaagatggt attgtgctttgcaagttgatcaacaagtcagtaccagatactattgacgagaggacaataaacaaaaccaagctgagtgt gtaccgtcagacagaaaaccacaatttggctctgaattccgctcaatctattggatgtaacattgtaaatataggaccag atgatctgatgaaaggcaagccccatcttgtgttaggtcttgtctggcaagttatcaggattggactgttaagtgatatt aatattgccatgcatcctggtctggtggctctcctacaaggcgatgaaaccatagaagacctcaagaggctttctccaga ggaaatccttatcagatgggttaactatcatttggaaaggtcaggaactgatagaagaattaaaaacttcacatcagata ttcaggactctgaagcatacagctatcttttagagcagatagcaccaagggaaagtggtgttaattcaggcgtaccatta agtgagtcagatttaactcagcgtgcagagaagatgttacaggaagcagagaagattgattgtcgtgcctttgtatcacc tggagatgttgtcaaaggaaactataagctcaacatggcttttgtcgctaaccttttcaatacttatccagctttggatg ctaacacagaaatattagaagacattgtggaagagaccagagaagaaaaaacttatcgtaattggatgaacagtatggga gttcaaccatatgtccactatttgtattctgatctcaatgatggattggtgattttcaaactttatgatataatacagcc aggctgcgtagactggaggagggtccatacaagattcaacaaaatgaaggaaaattttgaaaaacttgagaactgtaatt actgtgtagagcttggaaagcagcagaaattttcattggttggtgtaggaggacaagatattagggattctaatccaact cttacgctagctcttgtatggcagctaatgagggcgtacaccttaagcattctgaagaagctgtctgatgaggatagaca aatcacagatgctgatattattaactgggcaaacgcaaagctgaaggagtgtggaaagaaaagcagctttacaagttttc aagacaagacattgagtgatggacgaactgtgattgatttgattgacagtgtaaaagtaggatgtatcaactatgatata gtcaaagatgcctcatctgaagaagataggttatcgaatgccaagtatgccatttcaatggccaggaaagctggagccaa agtgtacgcactccctgaggacatagtagatgtaaagcccaagatgatgatgaccatatttgcctgtcttatgatcaaag atttgggatcgcagcaaaagcagaacggagaatag |
|
Protein
| Protein ID | pfu_aug2.0_471.1_04220.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04220.t1 MSSRVSQELSQDALDELQQAFQTIDVDSNGYIEADELQEALQLAGCKIAAYQARVIMQQYDTKHKDGKLEFDEFRAIYSD LQNKEVARTFKKAVTARKGVEVHGGTSEASVEGTTHTVRDEESKSFTEWINKTLEADDDCKAYLPMRPDSNDLYEKIKDG IVLCKLINKSVPDTIDERTINKTKLSVYRQTENHNLALNSAQSIGCNIVNIGPDDLMKGKPHLVLGLVWQVIRIGLLSDI NIAMHPGLVALLQGDETIEDLKRLSPEEILIRWVNYHLERSGTDRRIKNFTSDIQDSEAYSYLLEQIAPRESGVNSGVPL SESDLTQRAEKMLQEAEKIDCRAFVSPGDVVKGNYKLNMAFVANLFNTYPALDANTEILEDIVEETREEKTYRNWMNSMG VQPYVHYLYSDLNDGLVIFKLYDIIQPGCVDWRRVHTRFNKMKENFEKLENCNYCVELGKQQKFSLVGVGGQDIRDSNPT LTLALVWQLMRAYTLSILKKLSDEDRQITDADIINWANAKLKECGKKSSFTSFQDKTLSDGRTVIDLIDSVKVGCINYDI VKDASSEEDRLSNAKYAISMARKAGAKVYALPEDIVDVKPKMMMTIFACLMIKDLGSQQKQNGE |
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