Gene
| Gene Model ID | pfu_aug2.0_471.1_04221 |
|---|---|
| Locus | scaffold471.1 : 41336 ... 136335 : + |
| To GenomeBrowser | scaffold471.1:41336..136335 |
| Genes list of scaffold | scaffold471.1 |
| Synonym | pfu_aug1.0_1247.1_43952 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_471.1_04221.t1 | 8 | 1 | CH | 167 | 238 | 0.0 | 295.0 | 2.4e-07 | 0.00088 | 19.2 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 2 | CH | 271 | 374 | 0.0 | 295.0 | 3.4e-19 | 1.2e-15 | 57.4 |
| pfu_aug2.0_471.1_04221.t1 | 5 | 1 | CAMSAP_CH | 284 | 314 | 1.6e-09 | 37.2 | 0.062 | 230.0 | 1.5 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 3 | CH | 396 | 484 | 0.0 | 295.0 | 5.9e-13 | 2.2e-09 | 37.3 |
| pfu_aug2.0_471.1_04221.t1 | 5 | 2 | CAMSAP_CH | 407 | 448 | 1.6e-09 | 37.2 | 0.0051 | 19.0 | 4.9 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 4 | CH | 537 | 653 | 0.0 | 295.0 | 0.00014 | 0.52 | 10.3 |
| pfu_aug2.0_471.1_04221.t1 | 5 | 3 | CAMSAP_CH | 810 | 871 | 1.6e-09 | 37.2 | 5.6e-08 | 0.00021 | 20.8 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 5 | CH | 816 | 902 | 0.0 | 295.0 | 3.5e-15 | 1.3e-11 | 44.4 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 6 | CH | 938 | 1037 | 0.0 | 295.0 | 1.6e-20 | 5.8e-17 | 61.7 |
| pfu_aug2.0_471.1_04221.t1 | 5 | 4 | CAMSAP_CH | 951 | 964 | 1.6e-09 | 37.2 | 3.8 | 14000.0 | -4.2 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 7 | CH | 1058 | 1104 | 0.0 | 295.0 | 3.7e-07 | 0.0014 | 18.6 |
| pfu_aug2.0_471.1_04221.t1 | 8 | 8 | CH | 1123 | 1210 | 0.0 | 295.0 | 1.3e-13 | 4.8e-10 | 39.4 |
| pfu_aug2.0_471.1_04221.t1 | 5 | 5 | CAMSAP_CH | 1147 | 1208 | 1.6e-09 | 37.2 | 0.012 | 43.0 | 3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_471.1_04221.t1 | gi|260808363|ref|XP_002598977.1| | hypothetical protein BRAFLDRAFT_280793 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_471.1_04221.t1 | gi|383853630|ref|XP_003702325.1| | 0.0 | |
| pfu_aug2.0_471.1_04221.t1 | gi|242011868|ref|XP_002426666.1| | Plastin-3, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_471.1_04221.t1 | gi|241695321|ref|XP_002413054.1| | 65-kDa macrophage protein, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_471.1_04221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04221.t1 atggtcacacgtgacgacttcagtttcagcatcacagactttccttttctgagtagtagcatcccttcatcgcctactta tggcgtgttcatatctcaattgatacactatgccagagcaagtaccaaatatacagattttgttctgagacctaggcgtc tttcagataagcttctcagtcagggatacgtttgtgaccgacatgcatcgtcgctgaggaagttctactgtcgatacgtg gaactcttttcctcgacagactacaaatcatacaaatcatggacatgtagtgacctgtgtaatgccttgtccttcctctt ggacattatttatgttagatttggtgaggatctatacaaccaggttgtaggaattcctatgggtactaactgtgcgcctc ttgttgcagatttatttttatacacttatgaaaaagaatttacccaaaatcttcaaaagcgaagaaaatttgatgatctg aaatgtttcaataatactttcagtaaagtaatcaacgaggcagttccatataccattgatgagagagcaataagcaaatc caatctgaatgtaaaccgtcggacgggaaatctcatactggctctgaattcagctcaatctataggatgtaacattgaaa atataggaaacgatgatttgagtgaaggcagatctcatgctgtgttaaggcttgtctggcagatcataaaggtaggacta tttagggaaattaatattgacatccatcctggtataatagccatcggagatgaaagcgaaaccataaatgaccttttgcg gctctctccagaggacattcttgtgcgctggtttaactatcatttggagagggcaggaagtaaacacagaaggatcagaa acttcacaactgatattcaggactctgaagcatacagctatcttatagagcagatagcaccgaaggaaagtggtgttaac tcaagcataccgttaagtgaaccagacttacaccagcgtgcagagaagatgttactggaggcagagaagtttgattgtcg tgcctttgtatcacctggagatgttgtcaaaggaaactacaagctcaacatggcttttgttgctaatcttttcaacactt atccagctctggagcctataacaaacccaattatagtagatggtattctcgaagagaccagagaagaaaaaacatatcgt aattggatgaacagtatgggagttcaaccatatgtccactatctgtattctgatctcaatgatggattggttattttgaa aatttatgacataatacagccaggctgtgtggattggaagagagttgtaacaaacttcagtgaaagacttgagaactgca actactgtgttgagcttggatcccagctgaaattgacattagttggtatacatggacaggatataatggagggtaatgta gatagtatactaaaagataacaagtatgttctgtgtttggagggctcctatggtctacgacagaatattattattggaca aagggccatcatagtgtatgacgagttccccaaatcgaccatagaacttcctcagcgacgatgtttgttggtcacaaacc tgaaggaatgcgaaaaaaatagcagctttgcaagttttgaagacaagacgttgagtgatgggcgaacgatcattaatttg attgattgtgtaaaagtagggtccatcaattatgattttctgcagattgcaaccactgacgaaaaattcggattctgggc aaaggacattgtaagccccagagcaaggacatgtaacaagttcaaactcatacgggacattcctttttatgttctgaaag caaggttgtctaatgccaggtatgccatttcaatggccagaaaagctggagctgaagtgtatgcgcttcctgaggacata gtagataccttgctatcgactgggagagagcacctcgcatctcagttccattttaccttcagattcatatatgatgtgtt catcagtaatccgaactttaaggatcatctacatacaatatatcctcatggactagagaccaaggaaacaaccgagagcg acagatccgcttcgtacttggatatacttttatcttttgacgcaaacgatcattcaagcatctcactgtatgacaagcgt gatgatttgagattccacataaccagctttcctttcacgagtagctacattccatcttctcctgcttatggcgtttttgt ttcccagctcatacggtattccaggggatcttccaaatatgaagatttcatcgttagagcaagacggcttgcaagaacca aagcaaacaaacaaaaacctccaccacatgataagaagcgaactcccgatatgggattgaaaccaggtgcccaggaagtg attttggagggcgatccagactgccagagatatttgccattgagaccaaacagcgatgatctatacaagaaaataagaga tggaattttgctctgtaaagtaataaacaaggcagttccatataccattgatgagagagcaataagcaaaaccaatctga atgtaaaccgtcggacggaaaatctcatactggctctgaattcagctcaatccataggatgtaacattggaaatatagga aacgatgatctgagtaaaggcaggactcatgctgtgttaaatcttgtctggcagatcatcaaggtaggacttttaagagg tatcaacaatgccatccattctggtctactagttctcagagaggaaggcgaaaccactgaggacattttaaaggtttctc caaaggaattccttatgcgatgggttaactatcatttggagaaagcaggatgtagtagaggaatcagaaattttgcaaca gatattcaggactctgaagcatacagctgtcttttagaacagatagcaccaagggaaagtggtgttaattcgagcatacc gcttttggaagatgatttaactaagcgtgcagagaagatgttacaggaagcagagaagattgattgtcgtgcctttgtat cgcctggagatgttgtcaaaggaaaccacaagctcaacatggcttttgtcgctaaccttttcaaaacttatccagctcta gagcctcttacagacccagatatagaagagggcattttcgtggagaccagagaagaaaacaagaactgcaattactgtgt tgagcttggatcccagctgaaattgacattagttggtatacatggacaggatataatggatggcaatgaatctaatatac taagccttgtatggcagctgatgagggcgtataccttaagtattctgaataagctgtctcatgaggacagacaaatcaca gatgctgatattattaactgggcaaatgctaagctgaaggaatgtgaaaagaatagcagcttaacaagttttgaagacaa gacattgagtgatgggcaagcaatcattaatttgattgattgtgtaaaagtagggtccatcaactatgatcttctgcaga atacaaacacagtcgaagcaagattgtccaatgccaggtatgccatttcaatggccagaaaagctggagccaaagtgtac gcactccctgaggacatagtagatgttaagtcctttgcaaaggttaacattttcctaaagatcacgggtacgagggggaa gtatcatgagattctatcgagatttatgacggtgaatactctgtttgacgatgttaccatcatccagacatctggaagga ccgacgagttctcactggaaggaaaatttggttgttctcttcagaataacttgatatacaaagcctacatgcagcttctt gcagaatgtcatgatccggattatgtcagactgttttacagaaaccacaaagtcgctgttgaaaagcgaatacctgagtt cggtggttttggtggtggaccttcaaacgccgccgcttttattgtgttgtccaacagagtatgctctttaggcatgacgt tggaagaaatgtgttgtgtcggggccaatatcggtgcggacgttccatttttcatccatggctttgaaagtgcaaacgtt agtgggataggggaaatagtcgaacaattcccagagaatgctttagaccttgacttgatttgtcccgatatacaatgcaa tacaggacttgtgtacgaacattacagaaataatttctatgaggaaataacgttggaggagaatatctcatacagaaaaa tgaagagtatagaagtgatgaaatcaaaaaccgcatcagaagcaaatgacttattcaaatctacagtttgtttatatcca gaattagagaagcatgttggggagggttggcttatgagcgggactggtagctctatgttctccctacgacaacgataa |
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Protein
| Protein ID | pfu_aug2.0_471.1_04221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04221.t1 MVTRDDFSFSITDFPFLSSSIPSSPTYGVFISQLIHYARASTKYTDFVLRPRRLSDKLLSQGYVCDRHASSLRKFYCRYV ELFSSTDYKSYKSWTCSDLCNALSFLLDIIYVRFGEDLYNQVVGIPMGTNCAPLVADLFLYTYEKEFTQNLQKRRKFDDL KCFNNTFSKVINEAVPYTIDERAISKSNLNVNRRTGNLILALNSAQSIGCNIENIGNDDLSEGRSHAVLRLVWQIIKVGL FREINIDIHPGIIAIGDESETINDLLRLSPEDILVRWFNYHLERAGSKHRRIRNFTTDIQDSEAYSYLIEQIAPKESGVN SSIPLSEPDLHQRAEKMLLEAEKFDCRAFVSPGDVVKGNYKLNMAFVANLFNTYPALEPITNPIIVDGILEETREEKTYR NWMNSMGVQPYVHYLYSDLNDGLVILKIYDIIQPGCVDWKRVVTNFSERLENCNYCVELGSQLKLTLVGIHGQDIMEGNV DSILKDNKYVLCLEGSYGLRQNIIIGQRAIIVYDEFPKSTIELPQRRCLLVTNLKECEKNSSFASFEDKTLSDGRTIINL IDCVKVGSINYDFLQIATTDEKFGFWAKDIVSPRARTCNKFKLIRDIPFYVLKARLSNARYAISMARKAGAEVYALPEDI VDTLLSTGREHLASQFHFTFRFIYDVFISNPNFKDHLHTIYPHGLETKETTESDRSASYLDILLSFDANDHSSISLYDKR DDLRFHITSFPFTSSYIPSSPAYGVFVSQLIRYSRGSSKYEDFIVRARRLARTKANKQKPPPHDKKRTPDMGLKPGAQEV ILEGDPDCQRYLPLRPNSDDLYKKIRDGILLCKVINKAVPYTIDERAISKTNLNVNRRTENLILALNSAQSIGCNIGNIG NDDLSKGRTHAVLNLVWQIIKVGLLRGINNAIHSGLLVLREEGETTEDILKVSPKEFLMRWVNYHLEKAGCSRGIRNFAT DIQDSEAYSCLLEQIAPRESGVNSSIPLLEDDLTKRAEKMLQEAEKIDCRAFVSPGDVVKGNHKLNMAFVANLFKTYPAL EPLTDPDIEEGIFVETREENKNCNYCVELGSQLKLTLVGIHGQDIMDGNESNILSLVWQLMRAYTLSILNKLSHEDRQIT DADIINWANAKLKECEKNSSLTSFEDKTLSDGQAIINLIDCVKVGSINYDLLQNTNTVEARLSNARYAISMARKAGAKVY ALPEDIVDVKSFAKVNIFLKITGTRGKYHEILSRFMTVNTLFDDVTIIQTSGRTDEFSLEGKFGCSLQNNLIYKAYMQLL AECHDPDYVRLFYRNHKVAVEKRIPEFGGFGGGPSNAAAFIVLSNRVCSLGMTLEEMCCVGANIGADVPFFIHGFESANV SGIGEIVEQFPENALDLDLICPDIQCNTGLVYEHYRNNFYEEITLEENISYRKMKSIEVMKSKTASEANDLFKSTVCLYP ELEKHVGEGWLMSGTGSSMFSLRQR |
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