Gene
| Gene Model ID | pfu_aug2.0_471.1_04222 |
|---|---|
| Locus | scaffold471.1 : 138836 ... 145580 : + |
| To GenomeBrowser | scaffold471.1:138836..145580 |
| Genes list of scaffold | scaffold471.1 |
| Synonym | pfu_aug1.0_1247.1_43951 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_471.1_04222.t1 | 2 | 1 | SMC_N | 1 | 62 | 1.3e-07 | 31.1 | 1.4e-10 | 3.0e-07 | 29.8 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 1 | AAA_23 | 5 | 201 | 4.5e-10 | 40.1 | 2.1e-13 | 4.5e-10 | 40.1 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 1 | AAA_21 | 26 | 64 | 3.3e-11 | 43.7 | 5.9e-07 | 0.0013 | 18.8 |
| pfu_aug2.0_471.1_04222.t1 | 2 | 2 | SMC_N | 285 | 330 | 1.3e-07 | 31.1 | 1.8 | 3800.0 | -3.2 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 2 | AAA_21 | 292 | 403 | 3.3e-11 | 43.7 | 2.4e-10 | 5.0e-07 | 29.9 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 2 | AAA_23 | 292 | 314 | 4.5e-10 | 40.1 | 1.0 | 2200.0 | -1.3 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 3 | AAA_23 | 477 | 543 | 4.5e-10 | 40.1 | 0.47 | 990.0 | -0.2 |
| pfu_aug2.0_471.1_04222.t1 | 3 | 3 | AAA_21 | 501 | 558 | 3.3e-11 | 43.7 | 0.65 | 1400.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_471.1_04222.t1 | gi|156375560|ref|XP_001630148.1| | predicted protein [Nematostella vectensis] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_471.1_04222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04222.t1 atgttacgagcagtgactatccaaaatttcattctctttcatcaacgacagcgtttaaaattagaagatggagcaaattt catcatcggagccaacggtacaggtaaaagcagcatttttgaacttgttcgccgttgtttgtcgaaagaaacaaatatgt ctgcctcaaatatccacaataaggagcaagcaggatttgttgtttgtgaatttactataacggattgtatgaaagaggac ttgaccaaagtaggaatacagctatatccaggaacgatttttacttgtattttcgcccaacgccaagatcgaaaaattgg aaatgtcgacggactccttcacaaggttgtctttgtgcaagacagcaacaataagcagtcccaattgtttgtacaatctg gtaaaacagattttacttcatcaaaaacatttgacatcagaccagtgaatcttgttcaagaagctgacaaatcgctgtca caacgtcttggagactttattacatcgttggagtcggaacaggaagaacaagcctttgatgaaaaattacagtcgatagc agaagctctcagagaagcatacaatcaaaacgaaaatgttgaatattcctccgagacagttccacattcaagtaaagatc atgaaaatgattttggggctgagaattcgccaagagacaaagaagttaagaatagatgtgaagaagtcttgaagatcctt acagagagagttgtaacattattcggaaagcgttctgttgacccgtccatgtgggataaaagctcgcaaaggagatccgc tcatgctaccggagattattttacatcaaggcatgaaaaagcggaaatatttgttgaacttctcagcaaacgaaaccaag attacattgatcgtgatcaagaacaaatgtttttcaatgccttaatattccctcaaagatatgaattcgagctagacgaa aaaactatggagtgcacggcaatcaacaaaaacacggatttgaaaacttcgctgttaaaaacatcagagggaataattga agcaaaacaattatcattgatacttagttcttctaagtatgatacaattctcattcagaaccctgagaaaggaatgcatc ctccaatgatagagaaacttagagatcttgttctacggaggataaggaacaaagtggtcgttgtttcctcccataaccag aatctcatagcctcatggtcactgccgcgcacctttatgtgccgatttcactacattcaacctggtcactacgaaaatac cgttgtgccatgtaaatctctacctcagaacgcattagctggtgacgaactaaaaaagattccatttagtgcgcatgtcc tgtttgtggaaggtccatcagacaagaaaatgatccgttctgtcttgtacttgattcaggagaaaatcacatcaaaccag gaatgtgagatcttagatggaatcgaggacaaagagtcattttgtaaaataaaatgcctacctagttacatctccgacga agaggacagaaatcaggcagagttactagatttcacggaaaagaaggaagaatttctagacatccttgccaaaagttata ttttcatgtggacatgcgggaatattgaggacgtctttttggagaaagataatgtagcacgtgaaactgacccgaagaaa aaattgaaactgtcaaaagctgactttactagcatagagcactatgctgataaagctgttgctaaaccaaacgaggaagt gaaaaggcttcttggatttctctatcgtactacaaagcagttcatagaaaaatctcaacgtccagaaaatatcactttat actcccgataa |
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Protein
| Protein ID | pfu_aug2.0_471.1_04222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04222.t1 MLRAVTIQNFILFHQRQRLKLEDGANFIIGANGTGKSSIFELVRRCLSKETNMSASNIHNKEQAGFVVCEFTITDCMKED LTKVGIQLYPGTIFTCIFAQRQDRKIGNVDGLLHKVVFVQDSNNKQSQLFVQSGKTDFTSSKTFDIRPVNLVQEADKSLS QRLGDFITSLESEQEEQAFDEKLQSIAEALREAYNQNENVEYSSETVPHSSKDHENDFGAENSPRDKEVKNRCEEVLKIL TERVVTLFGKRSVDPSMWDKSSQRRSAHATGDYFTSRHEKAEIFVELLSKRNQDYIDRDQEQMFFNALIFPQRYEFELDE KTMECTAINKNTDLKTSLLKTSEGIIEAKQLSLILSSSKYDTILIQNPEKGMHPPMIEKLRDLVLRRIRNKVVVVSSHNQ NLIASWSLPRTFMCRFHYIQPGHYENTVVPCKSLPQNALAGDELKKIPFSAHVLFVEGPSDKKMIRSVLYLIQEKITSNQ ECEILDGIEDKESFCKIKCLPSYISDEEDRNQAELLDFTEKKEEFLDILAKSYIFMWTCGNIEDVFLEKDNVARETDPKK KLKLSKADFTSIEHYADKAVAKPNEEVKRLLGFLYRTTKQFIEKSQRPENITLYSR |
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