Gene
| Gene Model ID | pfu_aug2.0_471.1_04229 |
|---|---|
| Locus | scaffold471.1 : 218127 ... 225599 : + |
| To GenomeBrowser | scaffold471.1:218127..225599 |
| Genes list of scaffold | scaffold471.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_471.1_04229.t1 | 1 | 1 | Use1 | 34 | 113 | 2.8e-06 | 26.9 | 1.1e-09 | 3.4e-06 | 26.7 |
| pfu_aug2.0_471.1_04229.t1 | 1 | 1 | SNARE | 39 | 87 | 2.1e-08 | 33.7 | 1.1e-11 | 3.1e-08 | 33.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_471.1_04229.t1 | gi|676470772|ref|XP_009058959.1| | hypothetical protein LOTGIDRAFT_217988 [Lottia gigantea] | 1.0e-31 |
| pfu_aug2.0_471.1_04229.t1 | gi|524885848|ref|XP_005099527.1| | PREDICTED: BET1 homolog [Aplysia californica] | 2.0e-31 |
| pfu_aug2.0_471.1_04229.t1 | gi|156376747|ref|XP_001630520.1| | predicted protein [Nematostella vectensis] | 8.0e-29 |
| pfu_aug2.0_471.1_04229.t1 | gi|597794461|ref|XP_007259869.1| | PREDICTED: BET1 homolog [Astyanax mexicanus] | 2.0e-28 |
| pfu_aug2.0_471.1_04229.t1 | gi|50344746|ref|NP_001002046.1| | BET1 homolog [Danio rerio] | 5.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_471.1_04229.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04229.t1 atgagaagatcacatgcaatgaatggagggggatatcctccaccccagggctatcctccaccccagggatatccacaaac acagatgttagaggaagaaaatcagagaatggaggaagaactgtccagtaaagttaaaactttgaaagagttgacaatca atataggaaatgaagtaagagagcagaacaagtttctaggagaaatggaggaagactatgacaagtctggtaacattctg aaggcttctatgagtagactgatagctataacaaaagctggcggaccaaaactctggtgttatatgttcctctttatatt ctttgtattctttatgatttgggtgattgtccgatttaggtga |
|
Protein
| Protein ID | pfu_aug2.0_471.1_04229.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_471.1_04229.t1 MRRSHAMNGGGYPPPQGYPPPQGYPQTQMLEEENQRMEEELSSKVKTLKELTINIGNEVREQNKFLGEMEEDYDKSGNIL KASMSRLIAITKAGGPKLWCYMFLFIFFVFFMIWVIVRFR |
|