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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4711.1_06037
Locus scaffold4711.1 : 12136 ... 19666 : +
To GenomeBrowser scaffold4711.1:12136..19666
Genes list of scaffold scaffold4711.1
Synonym pfu_aug1.0_11328.1_46363

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4711.1_06037.t1 gi|156353326|ref|XP_001623020.1| hypothetical protein NEMVEDRAFT_v1g16989 [Nematostella vectensis] 1.0e-22
pfu_aug2.0_4711.1_06037.t1 gi|170574119|ref|XP_001892676.1| gene 11-1 protein precursor [Brugia malayi] 2.0e-15
pfu_aug2.0_4711.1_06037.t1 gi|635142052|ref|XP_007989123.1| PREDICTED: ice-structuring glycoprotein-like [Chlorocebus sabaeus] 5.0e-15
pfu_aug2.0_4711.1_06037.t1 gi|124511676|ref|XP_001348971.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] 3.0e-14
pfu_aug2.0_4711.1_06037.t1 gi|156379063|ref|XP_001631278.1| predicted protein [Nematostella vectensis] 4.0e-12

Transcript
Transcript IDpfu_aug2.0_4711.1_06037.t1
Definition-
>pfu_aug2.0_4711.1_06037.t1
atgatagcttcgaggtcatcaaggaaattaatgacagcttcaaggtcatcaaggaaactaatgatagcttcaatgtcatt
caggaaaacaatgctagcttcaaaaatatcaaggaaactaatgatagcttcaaggtcatcaaggaaactaaattatagct
tcaaagtcatcacggaaactaataataacttcaacgtcatcaaggatacaaatgatagcttaaaggtcatccaggaaaac
aatgctggcttcaaggtcatcaaggaaaataaatatagcttcaaggtcatcaaggaaactaatgataacttcaaggtcat
caagtatacaaattatagcttcgaggtaatccaggaaaacaatgctattttcaaggtcatcaagaaaactaatggtagct
tcaaggtcatcaagaaaactaatgatagcttcaaggtcatcaaggaaaataatgataacttcaaggtcatcaaggacaca
aacgatagcttcaaggtcatcaaggaatacaatgctagctttaaggtcatcaaggaaactactgatagcttcaaggccat
caagaaaactaatgctagcttcaaggtcatcaaggaaactaatgatagcttcaaggtcatcaagaaaactaaatga

Protein
Protein IDpfu_aug2.0_4711.1_06037.t1
Definition-
>pfu_aug2.0_4711.1_06037.t1
MIASRSSRKLMTASRSSRKLMIASMSFRKTMLASKISRKLMIASRSSRKLNYSFKVITETNNNFNVIKDTNDSLKVIQEN
NAGFKVIKENKYSFKVIKETNDNFKVIKYTNYSFEVIQENNAIFKVIKKTNGSFKVIKKTNDSFKVIKENNDNFKVIKDT
NDSFKVIKEYNASFKVIKETTDSFKAIKKTNASFKVIKETNDSFKVIKKTK

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