Gene
| Gene Model ID | pfu_aug2.0_472.1_07562 |
|---|---|
| Locus | scaffold472.1 : 156726 ... 180931 : + |
| To GenomeBrowser | scaffold472.1:156726..180931 |
| Genes list of scaffold | scaffold472.1 |
| Synonym | pfu_aug1.0_14946.1_61429 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta- -galactosyltransferase 1 | GO:0000030 GO:0006487 GO:0006928 GO:0007338 GO:0009312 GO:0009653 GO:0009986 GO:0015631 GO:0030203 GO:0030879 GO:0031985 GO:0032504 GO:0032879 GO:0035250 GO:0035251 GO:0042060 GO:0042127 GO:0042995 GO:0043065 GO:0044281 GO:0044421 GO:0044459 GO:0046872 GO:0048468 GO:0060429 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_472.1_07562.t1 | 1 | 1 | Glyco_transf_7N | 317 | 409 | 2.9e-24 | 84.9 | 2.8e-27 | 8.2e-24 | 83.5 |
| pfu_aug2.0_472.1_07562.t1 | 1 | 1 | Glyco_transf_7C | 455 | 518 | 4.6e-21 | 74.0 | 4.1e-24 | 1.2e-20 | 72.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_472.1_07562.t1 | gi|512839800|ref|XP_004884300.1| | 0.0 | |
| pfu_aug2.0_472.1_07562.t1 | gi|609529|gb|AAA58745.1| | beta-1,4-galactosyltransferase [Mus musculus] | 0.0 |
| pfu_aug2.0_472.1_07562.t1 | gi|500810|gb|AAA68219.1| | beta-1,4-galactosyltransferase, partial [Homo sapiens] | 0.0 |
| pfu_aug2.0_472.1_07562.t1 | gi|11602910|ref|NP_071641.1| | beta-1,4-galactosyltransferase 1 [Mus musculus] | 0.0 |
| pfu_aug2.0_472.1_07562.t1 | gi|544493941|ref|XP_005581590.1| | PREDICTED: beta-1,4-galactosyltransferase 1 [Macaca fascicularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_472.1_07562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_472.1_07562.t1 atgggttgtaaagcttcctacattttcgatgataactatgtcaaaacaaggaggggatttccaacaagactcggttgcag caccaacagtaacacaccaaacaccccaagtaaaaacacatacagcaaaagacaaggaacagcaaacgagacatcaaaca tcgaacataaaaggcaacacataaatcaacgagacctatgggcactcggtgccgacttaggacggccatcagccacgtta gtaacagatggtgtggttaacctggattacgtgcgcacaaccctcccactttaccggttacccaaaggggcgtacgaaat gcagtccgtgctctgccggctgtggcgagcttatgcatgttatcacccgaggagtccgaccgacattcagagaggacagg tggtcggggccctgtcttctctaaagaggtttggacagggcccgtcatggagtcccgtcgtcacagtcggtcaaagcgca agtcttaaggatgcgctggtgcaaggctgtagattggtgcagtaccatgccgagtgtccgtctggtgacattaggatcat atccacggaaatattgatagtcgcatacgacgctacggaacagttgcatcacgaattcttggtaggaatatcatccttac tagaagatatgctacgtggacgacatgattattctagctcaaagagtttacgatttatctacagaaataatgagacaagt gtcacgaaagtttctagacaacttagaaattttggacaaaaaaggataacaaattcaagtgtgttacatgtgcatagaga tgggtttgatcacgcggttggcaatactccgaaaaatatgctagaaatgctatccaatatggagtttctgtatcaaaagt gtgattttataagaaagcatggcttagagttggcagaaagtaaggaatatgaagtgtgctcttctctatgtccagcaaaa ccaccttgtctagttgggcgtgtggtgacggcagtcagtagtccctcctttgaagacctggaaactcagtacaaagatct catttctggaggtcgtcactcgccatctgaatgtctggctagacaccacgtggctgttatcatcgcctacaggaacagag aagaccacctcaagacgctgttgtataacttacacggctacttacagaggcagcaactgtattatggaatatttgttata gaacaggtcgtcactcgccatctgaatgtctggctagacaccacgtggctgttatcatcgcctacaggaacagagaagac cacctcaagacgctgttgtataacttacacggctacttacagaggcagcaactggattatggaatatttgttatcgaaca ggcgtttatacaccacatattttgggggtgtatcagccctctcccgccgtactgtggaggacgtgaatggattctctaac ttgtattttggttggggcggagaggacgacgacatgtggcgaagacttcatagaagaggatattcagtggtacgacctac agcagatgtcggcagatacaggacgttaccccatggacgggacaagggaaacgaagccaaccgcttaaattttaggaaga tcaacacggcagcttcccgaatggagtttgatggtttaaacaatctgaaatatacaaaattatctagttttgagaaaaag ctatacacgttgataacagtggatgtaaatgaaactgacgttttaacgaatctactttaa |
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Protein
| Protein ID | pfu_aug2.0_472.1_07562.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_472.1_07562.t1 MGCKASYIFDDNYVKTRRGFPTRLGCSTNSNTPNTPSKNTYSKRQGTANETSNIEHKRQHINQRDLWALGADLGRPSATL VTDGVVNLDYVRTTLPLYRLPKGAYEMQSVLCRLWRAYACYHPRSPTDIQRGQVVGALSSLKRFGQGPSWSPVVTVGQSA SLKDALVQGCRLVQYHAECPSGDIRIISTEILIVAYDATEQLHHEFLVGISSLLEDMLRGRHDYSSSKSLRFIYRNNETS VTKVSRQLRNFGQKRITNSSVLHVHRDGFDHAVGNTPKNMLEMLSNMEFLYQKCDFIRKHGLELAESKEYEVCSSLCPAK PPCLVGRVVTAVSSPSFEDLETQYKDLISGGRHSPSECLARHHVAVIIAYRNREDHLKTLLYNLHGYLQRQQLYYGIFVI EQVVTRHLNVWLDTTWLLSSPTGTEKTTSRRCCITYTATYRGSNWIMEYLLSNRRLYTTYFGGVSALSRRTVEDVNGFSN LYFGWGGEDDDMWRRLHRRGYSVVRPTADVGRYRTLPHGRDKGNEANRLNFRKINTAASRMEFDGLNNLKYTKLSSFEKK LYTLITVDVNETDVLTNLL |
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