Gene
| Gene Model ID | pfu_aug2.0_472.1_07563 |
|---|---|
| Locus | scaffold472.1 : 186212 ... 207906 : - |
| To GenomeBrowser | scaffold472.1:186212..207906 |
| Genes list of scaffold | scaffold472.1 |
| Synonym | pfu_aug1.0_14946.1_61430 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chromatin remodeling complex subunit | GO:0009987 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_472.1_07563.t1 | 3 | 1 | Actin | 31 | 78 | 4.1e-33 | 114.3 | 1.7e-09 | 4.2e-06 | 25.4 |
| pfu_aug2.0_472.1_07563.t1 | 3 | 2 | Actin | 235 | 281 | 4.1e-33 | 114.3 | 0.53 | 1300.0 | -2.6 |
| pfu_aug2.0_472.1_07563.t1 | 3 | 3 | Actin | 449 | 593 | 4.1e-33 | 114.3 | 5.1e-28 | 1.3e-24 | 86.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_472.1_07563.t1 | gi|390331891|ref|XP_784230.3| | 0.0 | |
| pfu_aug2.0_472.1_07563.t1 | gi|121714657|ref|XP_001274939.1| | chromatin remodeling complex subunit (Arp5), putative [Aspergillus clavatus NRRL 1] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_472.1_07563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_472.1_07563.t1 atggggagatcaggaagccgtttaaatgtttggtggctttggccagtgaaaaacataaattggtctgcagtgaaaagtca agataagtgtgattcattagtgctatcctgtggttatcagaccacacatattttaccagtgttggacggtaggatggacc ccaaacactgccgtaggatcaatctgggcggggctcaactcgacgccttcatgcagaggttattacagcttaaatatcca ggtcacatggctgctgtatctctaggaagggcggaggagttgatacgagatcattgtcacatggccgtagattatacatc agagctggaggaatggacatcagatacttactatgatgataatgttcacaaaatacaactaccttataatgctgcggtga gtgggaaccagttatcagcagatcagatgaaggagagaagagagcaacaaataaaacgactcaaagaagctaacgccaaa cggagacttgaaaaattacaatcagatgaagaaaagctacaggaacttatgagtgtacaagaattattagaagacgaaga tgaagaagctttcaatagagccctgcaggctttgccccatgattacagtagtgcagaggaattacaagatgatataaaca agcttacagtttctatacagcgacttaaagccaagataatgggaacagaacctccagctgtagaagaatccaaagctcca gtctatgacttgttagatataccggacgatcagctgaccacggaccagttatctgccaagaaacggcagaggatcctgaa aaatgccagggagggacgcatcaaagctcaggcaatacaaagggaaaaacaacaaagggaaagagaagaagagaggagat tggaactaaaaagaaaatctaactttgttggatggcttcaagaagttagaaacagaagacagaaacttcttgaaatgaga aataatcggaaacagaggaaagcagacatggcaaagagaagaactctggcttcacaacaaagaatgaagattataacaca actagctggggatgaagaaaagctacaggagcttatgagtgttcaagaattattagaagacgaagatgaggaagctttca atagggccctgcaggctttgccgtatgattacagtagtgcagaggaattacaagatgatataaacaagcttacagtttct atacagcgacttaaagccaagataatgggaacagaacctccagctgtagaagaacatcctcagaatgccgacagtgactc tgatgcagaggaggacaagttagaggaattagaaacgttactaagggaacatgacccagaattccaaaaagaaatggacg ccagtatgggaccgtccacagaattcgacatagcagagtattatagacttcatttagccattgaaaaaatcagagtgcca gagcttcttttccagccatcaatgataggtatagagcaggcaggaatctcagaagctatggattttgtaataaaaaagta tcaaccagatgttcaaaacaggattgtacaggacgtgttcttgactggtggatgtgcaatgtttgatagatttaaggaga ggttagaaaaagatctcttagaattgagaccattcaaatccaaattcaacttgtcagttgcaaacaacccaatattagat gcttggtgtggtgctagacagtgggctttgtctcctacattaccgatatatagtgtaacaaaggaagagtatgaagagaa ggggggagaatatctcaaggaaaacgtcacctccaatagatacattccaacaccagtgactgctacaaagtga |
|
Protein
| Protein ID | pfu_aug2.0_472.1_07563.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_472.1_07563.t1 MGRSGSRLNVWWLWPVKNINWSAVKSQDKCDSLVLSCGYQTTHILPVLDGRMDPKHCRRINLGGAQLDAFMQRLLQLKYP GHMAAVSLGRAEELIRDHCHMAVDYTSELEEWTSDTYYDDNVHKIQLPYNAAVSGNQLSADQMKERREQQIKRLKEANAK RRLEKLQSDEEKLQELMSVQELLEDEDEEAFNRALQALPHDYSSAEELQDDINKLTVSIQRLKAKIMGTEPPAVEESKAP VYDLLDIPDDQLTTDQLSAKKRQRILKNAREGRIKAQAIQREKQQREREEERRLELKRKSNFVGWLQEVRNRRQKLLEMR NNRKQRKADMAKRRTLASQQRMKIITQLAGDEEKLQELMSVQELLEDEDEEAFNRALQALPYDYSSAEELQDDINKLTVS IQRLKAKIMGTEPPAVEEHPQNADSDSDAEEDKLEELETLLREHDPEFQKEMDASMGPSTEFDIAEYYRLHLAIEKIRVP ELLFQPSMIGIEQAGISEAMDFVIKKYQPDVQNRIVQDVFLTGGCAMFDRFKERLEKDLLELRPFKSKFNLSVANNPILD AWCGARQWALSPTLPIYSVTKEEYEEKGGEYLKENVTSNRYIPTPVTATK |
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