Gene
| Gene Model ID | pfu_aug2.0_474.1_14194 |
|---|---|
| Locus | scaffold474.1 : 41508 ... 45095 : - |
| To GenomeBrowser | scaffold474.1:41508..45095 |
| Genes list of scaffold | scaffold474.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 26s proteasome complex subunit dss1-like | GO:0000502 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_474.1_14194.t1 | 1 | 1 | DSS1_SEM1 | 11 | 70 | 2.3e-21 | 75.3 | 2.0e-25 | 3.0e-21 | 74.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_474.1_14194.t1 | gi|562858186|ref|XP_006157569.1| | PREDICTED: 26S proteasome complex subunit DSS1-like [Tupaia chinensis] | 3.0e-20 |
| pfu_aug2.0_474.1_14194.t1 | gi|555968386|ref|XP_005896228.1| | PREDICTED: 26S proteasome complex subunit DSS1-like [Bos mutus] | 2.0e-19 |
| pfu_aug2.0_474.1_14194.t1 | gi|562872705|ref|XP_006164274.1| | PREDICTED: 26S proteasome complex subunit DSS1-like [Tupaia chinensis] | 1.0e-18 |
| pfu_aug2.0_474.1_14194.t1 | gi|625216023|ref|XP_007648433.1| | PREDICTED: LOW QUALITY PROTEIN: 26S proteasome complex subunit DSS1 [Cricetulus griseus] | 2.0e-18 |
| pfu_aug2.0_474.1_14194.t1 | gi|241852260|ref|XP_002415824.1| | 26S proteasome complex subunit DSS1, putative [Ixodes scapularis] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_474.1_14194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_474.1_14194.t1 atggcagacaaaaagcaagaaaaaagttcggaaaagaagcctgatttaggattattggaagaagatgacgaattcgaaga gtttccagctgaagattggcagggagaggaagaagatgatgaagacagagtgaatatctgggaagacaattgggatgatg ataatatagaagacgatttttctttacaactcaggacagagctggagaagcaagggaaaatcaatggacggacaagaacc aatgaaatgacctcaagctacatcaacatataa |
|
Protein
| Protein ID | pfu_aug2.0_474.1_14194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_474.1_14194.t1 MADKKQEKSSEKKPDLGLLEEDDEFEEFPAEDWQGEEEDDEDRVNIWEDNWDDDNIEDDFSLQLRTELEKQGKINGRTRT NEMTSSYINI |
|