Gene
| Gene Model ID | pfu_aug2.0_474.1_14196 |
|---|---|
| Locus | scaffold474.1 : 83683 ... 90175 : - |
| To GenomeBrowser | scaffold474.1:83683..90175 |
| Genes list of scaffold | scaffold474.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_474.1_14196.t1 | 1 | 1 | CUB | 16 | 124 | 2.7e-20 | 72.4 | 2.4e-24 | 3.6e-20 | 72.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_474.1_14196.t1 | gi|512862819|ref|XP_002944440.2| | PREDICTED: embryonic protein UVS.2-like isoform X1 [Xenopus (Silurana) tropicalis] | 3.0e-15 |
| pfu_aug2.0_474.1_14196.t1 | gi|156386290|ref|XP_001633846.1| | predicted protein [Nematostella vectensis] | 3.0e-14 |
| pfu_aug2.0_474.1_14196.t1 | gi|260835964|ref|XP_002612977.1| | hypothetical protein BRAFLDRAFT_143777 [Branchiostoma floridae] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_474.1_14196.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_474.1_14196.t1 atgctctatttttgttcgaccaaaaggggaaatgaagaaaccttttgcggtggagtgcttgaaggattctcaggatactt aaagtcaccaggatatcctaacaactacagtcagaatttgtcttgtgtatggctggtcgcttccaatcagggatacagaa tccagcttcagtgtcatgagtttcagcttcaatcaagaggtgcagactctaaatgtaaagatcaattccagatgaaggac atggttaccgaaagaataatcttccaggattgtggcagtctatctccgtttgatgttgagtcagattctcatgaagttat gatatatttctacactgatgatgttgaacaatacaaaggattcgttttcacatgggcagctgaagaggattcaaactctc cgaaatatatcagtactgaaaccagtggtaaatatgaatgtctctga |
|
Protein
| Protein ID | pfu_aug2.0_474.1_14196.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_474.1_14196.t1 MLYFCSTKRGNEETFCGGVLEGFSGYLKSPGYPNNYSQNLSCVWLVASNQGYRIQLQCHEFQLQSRGADSKCKDQFQMKD MVTERIIFQDCGSLSPFDVESDSHEVMIYFYTDDVEQYKGFVFTWAAEEDSNSPKYISTETSGKYECL |
|