Gene
| Gene Model ID | pfu_aug2.0_476.1_20819 |
|---|---|
| Locus | scaffold476.1 : 193375 ... 199365 : + |
| To GenomeBrowser | scaffold476.1:193375..199365 |
| Genes list of scaffold | scaffold476.1 |
| Synonym | pfu_aug1.0_11469.1_10329 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| kappa-type opioid receptor | GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_476.1_20819.t1 | 1 | 1 | 7tm_1 | 59 | 305 | 2.6e-19 | 69.3 | 2.3e-23 | 3.5e-19 | 68.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_476.1_20819.t1 | gi|597745191|ref|XP_007234633.1| | PREDICTED: delta-type opioid receptor-like [Astyanax mexicanus] | 6.0e-10 |
| pfu_aug2.0_476.1_20819.t1 | gi|562820955|ref|XP_006140406.1| | PREDICTED: kappa-type opioid receptor-like [Tupaia chinensis] | 3.0e-08 |
| pfu_aug2.0_476.1_20819.t1 | gi|260805612|ref|XP_002597680.1| | hypothetical protein BRAFLDRAFT_217292 [Branchiostoma floridae] | 7.0e-08 |
| pfu_aug2.0_476.1_20819.t1 | gi|742176706|ref|XP_010887024.1| | PREDICTED: mu-type opioid receptor isoform X1 [Esox lucius] | 8.0e-08 |
| pfu_aug2.0_476.1_20819.t1 | gi|189233529|ref|NP_001121535.1| | galanin receptor type 2 [Gallus gallus] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_476.1_20819.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_476.1_20819.t1 atgaactatctagccctggggaacgggtccagagttttgtcaacgctcttcatacagaccgggaataataccacgttatg tcagccggggagtaaggactccccataccacggtgttagctaccccctcctctatatcaccctcacctctgttatatctc tcctgggggtgataggtaacatcgccacaatatcccgggttgtcacacatgtcaaattcaaaggagccttcttcagagct tttgcgtgcttatcgtttgcggatcttgtttctttattgatgtactattttcgtatttatgtggagtttggttacataac aattgcaagtggaaatcatattaaagcgatattcaacgccgtgacaataacgactgtacatgcatccgctgcgcatcttg tgcttgttgcctgcttccggtacattctcctgacgcatccattgtactttcggtgttacgtcaaaccaagaacagtgatt cacgtgtccgtgttttgttggattattagtttaggagtcggtacgggatacgcgttctatgaccacgcctacttcagctc ttgggtgaactcgcgtggtgactcggtagtccagctgtcaatgagtctttacgtactgattgttccgttgtcagtgttta tatttctgcattgcctccagttaagggcactggatacttcattattgtccgaaaaatctaaaacaaaacggaaactgtcc cacatgatgttcattattgcctttatatatacagcctgttacatgccttttctgtcaagaaacataattattgtactgca ggaaagtcagtcgatatcactaagtgcatacagatttggttggataagaaaagaaatgcagcatatagcgacaatatttc aggtgcttaattactctgtgaatcccatagtgtacatattctattcaaatacttttggaagaatcggtcgtgcattaacc aaacataaacgaggtcattctgaaatcctacttcctcgtacagtgatacaagacaaaagtgaaagtagaggacttgttcg agtgaacacgtggcctacgatacaaacagaatcatacgaactaccaaactaa |
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Protein
| Protein ID | pfu_aug2.0_476.1_20819.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_476.1_20819.t1 MNYLALGNGSRVLSTLFIQTGNNTTLCQPGSKDSPYHGVSYPLLYITLTSVISLLGVIGNIATISRVVTHVKFKGAFFRA FACLSFADLVSLLMYYFRIYVEFGYITIASGNHIKAIFNAVTITTVHASAAHLVLVACFRYILLTHPLYFRCYVKPRTVI HVSVFCWIISLGVGTGYAFYDHAYFSSWVNSRGDSVVQLSMSLYVLIVPLSVFIFLHCLQLRALDTSLLSEKSKTKRKLS HMMFIIAFIYTACYMPFLSRNIIIVLQESQSISLSAYRFGWIRKEMQHIATIFQVLNYSVNPIVYIFYSNTFGRIGRALT KHKRGHSEILLPRTVIQDKSESRGLVRVNTWPTIQTESYELPN |
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