Gene
| Gene Model ID | pfu_aug2.0_476.1_20822 |
|---|---|
| Locus | scaffold476.1 : 241015 ... 258490 : + |
| To GenomeBrowser | scaffold476.1:241015..258490 |
| Genes list of scaffold | scaffold476.1 |
| Synonym | pfu_aug1.0_3180.1_16039 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase 8 isoform x1 | GO:0005524 GO:0006351 GO:0006468 GO:0008353 GO:0050794 GO:0051301 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_476.1_20822.t1 | 1 | 1 | Pkinase | 26 | 315 | 0.0 | 190.0 | 0.0 | 0.0 | 189.7 |
| pfu_aug2.0_476.1_20822.t1 | 1 | 1 | Pkinase_Tyr | 26 | 240 | 9.6e-26 | 90.3 | 5.6e-29 | 1.7e-25 | 89.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_476.1_20822.t1 | gi|242012853|ref|XP_002427141.1| | mitogen-activated protein kinase ERK-A, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_476.1_20822.t1 | gi|556960038|ref|XP_005990610.1| | PREDICTED: cyclin-dependent kinase 8 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_476.1_20822.t1 | gi|556960035|ref|XP_005990609.1| | PREDICTED: cyclin-dependent kinase 8 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_476.1_20822.t1 | gi|676480813|ref|XP_009062181.1| | hypothetical protein LOTGIDRAFT_210630 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_476.1_20822.t1 | gi|45361337|ref|NP_989246.1| | cyclin-dependent kinase 8 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_476.1_20822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_476.1_20822.t1 atggattatgactttaaacgcagaacagcagctgaaagacaaaaagtagaagacttattcgactttgaaggatgtaaagt cggacgtggtacctatggtcatgtctataaagccaaaagaaaggatgggacagagggacgtgaattcgcccttaagcaga ttgaaggcactggaatatcaatgtcagcatgcagagaaatagctttgttgcgagagcttaaacaccccaatgtgatcagc ttacagaaagtattcttgtctcatcaagacaggaaagtatggctactgttcgactatgcagagcatgatctatggcacat catcaaattccatagatcagctaaggccagtaaaaaaccagttgatgtgccaaaaaatatggtgaaatcattattattcc aaatcctggatggaatccattatctacatgccaactgggtccttcacagagatttgaaaccagccaatattcttgtaatg ggtgaaggtcaagagagaggcagggttaaaattgctgacatgggttttgccagactctttaattctccgttaaagcctct tgctgaccttgatccagtggttgtgacattctggtacagagctccagaactcttacttggtgctagacattatactaaag caatagatatatgggccataggttgtatatttgctgaactgttgacttatgaaccaatttttcactgtcgtcaagaagac attaaaactagtaacccttaccaccatgaccaactcgacagaatatttaatgttatgggatttcctttagtcttatcatg ttatagtacctgctcattggtgaagtatatggataaacataaagttaaaccagacacaaaacaatttcaattgcttcagc gattgctaacgatggaccctaccaaacgtattacctcagaccaagccatgaaggatgcttacttcatggaggatccactg ccatctcaagatatatttgaagggaagccaattccgtacccaaagcgtgaatttctgactgatgacgatgatgataaagc tgatagcaaggctggtggtgctgaacagtcatccaaccataatcaacctcctgcaaaaagagtcagagttatgccccctt ctacaaccacaagctcttctatgcacatacataatgttcagaacagtggtcagcagggtatgaccttctcctctggggcc ctccctacctctaccccatccacctctaattacgtacagtcatcacgatactga |
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Protein
| Protein ID | pfu_aug2.0_476.1_20822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_476.1_20822.t1 MDYDFKRRTAAERQKVEDLFDFEGCKVGRGTYGHVYKAKRKDGTEGREFALKQIEGTGISMSACREIALLRELKHPNVIS LQKVFLSHQDRKVWLLFDYAEHDLWHIIKFHRSAKASKKPVDVPKNMVKSLLFQILDGIHYLHANWVLHRDLKPANILVM GEGQERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTYEPIFHCRQED IKTSNPYHHDQLDRIFNVMGFPLVLSCYSTCSLVKYMDKHKVKPDTKQFQLLQRLLTMDPTKRITSDQAMKDAYFMEDPL PSQDIFEGKPIPYPKREFLTDDDDDKADSKAGGAEQSSNHNQPPAKRVRVMPPSTTTSSSMHIHNVQNSGQQGMTFSSGA LPTSTPSTSNYVQSSRY |
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