Gene
| Gene Model ID | pfu_aug2.0_4767.1_25982 |
|---|---|
| Locus | scaffold4767.1 : 3729 ... 20975 : - |
| To GenomeBrowser | scaffold4767.1:3729..20975 |
| Genes list of scaffold | scaffold4767.1 |
| Synonym | pfu_aug1.0_2511.1_15850 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translation initiation factor eif-2b subunit delta | GO:0044237 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4767.1_25982.t1 | 1 | 1 | IF-2B | 220 | 345 | 2.3e-17 | 62.8 | 6.2e-21 | 4.6e-17 | 61.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4767.1_25982.t1 | gi|676484072|ref|XP_009063228.1| | hypothetical protein LOTGIDRAFT_129894, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4767.1_25982.t1 | gi|390337934|ref|XP_003724677.1| | PREDICTED: translation initiation factor eIF-2B subunit delta [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_4767.1_25982.t1 | gi|260790040|ref|XP_002590052.1| | hypothetical protein BRAFLDRAFT_240825 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_4767.1_25982.t1 | gi|198434022|ref|XP_002131869.1| | PREDICTED: translation initiation factor eIF-2B subunit delta-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_4767.1_25982.t1 | gi|529427671|ref|XP_005233664.1| | PREDICTED: translation initiation factor eIF-2B subunit delta [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4767.1_25982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4767.1_25982.t1 atggctgatgcaaaatctccggagtgtgagaaactggagaaagtgactgacgggaagacaaaacctgtggaaggtcaagg tggcggaaagaaaaaagaaaagaaagagaaaaaagcaaagataaaagaaggtcaaagtgccagtcaggataaaggtcaag gtcaaaatgccagtcaggataaaggtcaaggtgaacaaaatgactctgtaggagaagtaaaaagtaaacccaaactgacc aaagcagaaaggcgagaaattcaggagagacagcgagcagagaaagaagccaggaaagctgctgctgctgccggtggtag taaagacgccccacaagctgcagctcctggtacgttacaattacaaaatcaggttttatttaaagccgtagccgcagctc ctgctgccaagaaaaatgagcctaaacgtgtaccagacagcatcaaagctgatgatgcagaaactcaaaaacgtgtagca aaaaagttagagaaacaacatatacctcagagaacctcggcacaaagaaaagtccgactatttaatcatctacaccaata cgagcgagaagtatctctcacacagtctttaccattttcctctacgggcattcaccctgtgatagtcaggttaggtttac agtacgccgagggagtaatcagcggatctaatgccaggtgcttagccatgcttgctgctttcaaacaggttataagggac tatgtcactccacctcagaaagagctttccagggatctcgaggcaaaaatcaaaccttacataacatttctcaatcagtg tagactattatcagtcagtatgggaaatgccatcaaatatttaaagtaccacataacgcggacaccaaacgatataggag atatagaggccaagcagcagttattaaaccatatagacagttttattaaggagagaatcttgttggcagcggatgccatc tcaaaatacgtcaaagacgagaagaaaatagtagatggagatgttatagttgttttctcatgacacaaaatactgcgacc tttggtttataagaagtacaatgccagttaa |
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Protein
| Protein ID | pfu_aug2.0_4767.1_25982.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4767.1_25982.t1 MADAKSPECEKLEKVTDGKTKPVEGQGGGKKKEKKEKKAKIKEGQSASQDKGQGQNASQDKGQGEQNDSVGEVKSKPKLT KAERREIQERQRAEKEARKAAAAAGGSKDAPQAAAPGTLQLQNQVLFKAVAAAPAAKKNEPKRVPDSIKADDAETQKRVA KKLEKQHIPQRTSAQRKVRLFNHLHQYEREVSLTQSLPFSSTGIHPVIVRLGLQYAEGVISGSNARCLAMLAAFKQVIRD YVTPPQKELSRDLEAKIKPYITFLNQCRLLSVSMGNAIKYLKYHITRTPNDIGDIEAKQQLLNHIDSFIKERILLAADAI SKYVKDEKKIVDGDVIVVFSXHKILRPLVYKKYNAS |
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