Gene
| Gene Model ID | pfu_aug2.0_4785.1_19359 |
|---|---|
| Locus | scaffold4785.1 : 8666 ... 22273 : + |
| To GenomeBrowser | scaffold4785.1:8666..22273 |
| Genes list of scaffold | scaffold4785.1 |
| Synonym | pfu_aug1.0_39080.1_41106 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4785.1_19359.t1 | 1 | 1 | RVT_1 | 355 | 445 | 7.0e-14 | 51.6 | 3.0e-17 | 1.5e-13 | 50.6 |
| pfu_aug2.0_4785.1_19359.t1 | 1 | 1 | Herpes_alk_exo | 533 | 643 | 2.4e-06 | 26.3 | 8.4e-10 | 4.2e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4785.1_19359.t1 | gi|585718136|ref|XP_006825823.1| | PREDICTED: uncharacterized protein LOC102805923 [Saccoglossus kowalevskii] | 3.0e-19 |
| pfu_aug2.0_4785.1_19359.t1 | gi|552817625|ref|XP_005844991.1| | hypothetical protein CHLNCDRAFT_138418 [Chlorella variabilis] | 4.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_4785.1_19359.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4785.1_19359.t1 atgatacggccgggattctacttgcctccgcttcgtcgcgccatgttttcttactgcgttcatgctacgataatgacact tcaagatataaattatttagacgaggtatgttttgacttttttgagccatcaaaccgagaacgtgttccagagttgagcg aggaggagaagcttcagatacttaactccgaggagtttcagacgttctttgctcgttcatcgaggattatcgagcgagcg ttatgcgagtctgttgacatatttacggactactccggagcagaaggggaaggtaacctggagtctgaggatttgccaac cgtcctccatggttgtgttagatattctaanttaccaaaaaagaagttgtatcagctccttagtacaaatcagggagtat ctgatatcacaggtattctgaatggaatatttagtcctttctgctctcgtaaaattgtcatacaaaacgcttctaaactc agaaagtcagatgaccaagtatggtttgacaatagatgtaaaatactttattctgaatacaagtctgctcttcgaatctt taatcgtaatagatcagagttcaatcgtactaatttagttgaggccaaacggcaatacaaacgacatacaaataagtgca agagggattatttacgttttgaaggaaataaattagactatctaagaacaaggaacccgaagcaattctacaaaattttt cgaaagaaaaagagcaacaaaactaaactgacatgttgtgatttcttccaacattttcaaaaagtatgtagcacaactat cgaaagcgatgacaattctcgaacagctaatttaacttccaatgatatgccaatttttcaagaattagatagacttatag atgaaaaagaagttcatgatgcattaaataaacttaaaagtggcaaagcatgtggtatcgaccacctcttgaacgaatat tttatgaaattcaaagacatcctggcacccattcttgctcgtcttttcaatattatatttgattctggggaatttccgag tgattggtcaacgggtatcattatcccattacacaaaaagggggataccgacaatacggacaattacaggggcttgatgc agggtgaggcattgtcacctttcctcttttctatgtacatcaatgatttcgaatcggaacttattaccaagaactgtgaa cctgtaaatttaagagagttatcgttatttgttttattatttgccgatgacactgtcctgtttgcagaaacaagaagtga acttcagaatattttaaacgaattacattcttatagtagagactggggtatcgagtatccgtcatcaggaaaggggacgg aggtggggacggatgtggaatgtgtatgggacaagccacgtaaggagtcggttcccatggaggtggatgatattgacatt ataattgacactaaaattcccattaagaaaaccccaactagtaaaaattatcaagctgtcaaaaatgtttctacagattc agtgagaaaagaattaaaagcagtttgtaaaggtacagaagcattattattacaaactttatatgatgaaggagatgaag aaagtgatgatagtgaaatagagtatgttcctacagtttttgaagtagccaaatctaatcctcataatgtttttgatgcc atgaagaaaatttttgataaagaagcggtcgaaaaaattgagcaaaatacaaagaagcagagtgagaatccagagtggtt taagcagagaaggggaagaattttttccacaattttacattttaaattcacagatgccaatgaaaattacttatctaaga taatccttgggcaatcacgatcttttaatacactatctgttgattttgggaaaatgcatgaatcagtagcaagacaaatg tacacaacagattataagaaaattcacaaaaagtctagtattgaaacaaatggttaa |
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Protein
| Protein ID | pfu_aug2.0_4785.1_19359.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4785.1_19359.t1 MIRPGFYLPPLRRAMFSYCVHATIMTLQDINYLDEVCFDFFEPSNRERVPELSEEEKLQILNSEEFQTFFARSSRIIERA LCESVDIFTDYSGAEGEGNLESEDLPTVLHGCVRYSXLPKKKLYQLLSTNQGVSDITGILNGIFSPFCSRKIVIQNASKL RKSDDQVWFDNRCKILYSEYKSALRIFNRNRSEFNRTNLVEAKRQYKRHTNKCKRDYLRFEGNKLDYLRTRNPKQFYKIF RKKKSNKTKLTCCDFFQHFQKVCSTTIESDDNSRTANLTSNDMPIFQELDRLIDEKEVHDALNKLKSGKACGIDHLLNEY FMKFKDILAPILARLFNIIFDSGEFPSDWSTGIIIPLHKKGDTDNTDNYRGLMQGEALSPFLFSMYINDFESELITKNCE PVNLRELSLFVLLFADDTVLFAETRSELQNILNELHSYSRDWGIEYPSSGKGTEVGTDVECVWDKPRKESVPMEVDDIDI IIDTKIPIKKTPTSKNYQAVKNVSTDSVRKELKAVCKGTEALLLQTLYDEGDEESDDSEIEYVPTVFEVAKSNPHNVFDA MKKIFDKEAVEKIEQNTKKQSENPEWFKQRRGRIFSTILHFKFTDANENYLSKIILGQSRSFNTLSVDFGKMHESVARQM YTTDYKKIHKKSSIETNG |
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