Gene
| Gene Model ID | pfu_aug2.0_48.1_26730 |
|---|---|
| Locus | scaffold48.1 : 103735 ... 134385 : - |
| To GenomeBrowser | scaffold48.1:103735..134385 |
| Genes list of scaffold | scaffold48.1 |
| Synonym | pfu_aug1.0_5111.1_67163 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_48.1_26730.t1 | 13 | 1 | Sel1 | 489 | 501 | 0.0 | 196.8 | 0.0072 | 36.0 | 5.1 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 2 | Sel1 | 511 | 536 | 0.0 | 196.8 | 0.17 | 860.0 | 0.7 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 3 | Sel1 | 539 | 572 | 0.0 | 196.8 | 0.0042 | 21.0 | 5.9 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 4 | Sel1 | 574 | 607 | 0.0 | 196.8 | 1.9e-08 | 9.2e-05 | 22.9 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 5 | Sel1 | 614 | 649 | 0.0 | 196.8 | 2.2e-10 | 1.1e-06 | 29.0 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 6 | Sel1 | 651 | 686 | 0.0 | 196.8 | 2.5e-08 | 0.00013 | 22.5 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 7 | Sel1 | 688 | 721 | 0.0 | 196.8 | 1.5e-09 | 7.3e-06 | 26.4 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 8 | Sel1 | 723 | 758 | 0.0 | 196.8 | 1.8e-11 | 8.8e-08 | 32.5 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 9 | Sel1 | 761 | 793 | 0.0 | 196.8 | 1.2e-05 | 0.061 | 13.9 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 10 | Sel1 | 829 | 866 | 0.0 | 196.8 | 0.00015 | 0.75 | 10.5 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 11 | Sel1 | 869 | 902 | 0.0 | 196.8 | 2.2e-07 | 0.0011 | 19.5 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 12 | Sel1 | 904 | 936 | 0.0 | 196.8 | 8.2e-11 | 4.0e-07 | 30.4 |
| pfu_aug2.0_48.1_26730.t1 | 13 | 13 | Sel1 | 948 | 956 | 0.0 | 196.8 | 3.0 | 15000.0 | -3.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_48.1_26730.t1 | gi|585668058|ref|XP_006817427.1| | PREDICTED: protein sel-1 homolog 1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_48.1_26730.t1 | gi|676431521|ref|XP_009046279.1| | hypothetical protein LOTGIDRAFT_110816, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_48.1_26730.t1 | gi|524882530|ref|XP_005097908.1| | PREDICTED: protein sel-1 homolog 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_48.1_26730.t1 | gi|524882532|ref|XP_005097909.1| | PREDICTED: protein sel-1 homolog 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_48.1_26730.t1 | gi|634879283|ref|XP_007950161.1| | PREDICTED: protein sel-1 homolog 1 [Orycteropus afer afer] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_48.1_26730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26730.t1 atggaaactccaaatagtccagtgtgttataattgttttgacaaaaggagaacactgagacagatatggtgcctagcttt cacacttcttatcttcacacattccacatactcacaagcccctggtcactcatcatctaaggctttaaataaggaggaca caggacaatctagcaataagaatgcaggtactcaaaaatctaatcaaatcaatagagggaaggggggaaactctgaagga atagtaaacggaaagagttctgaatctttacagtctgactctgctcaacaaagtgataattctgtcaaaagtaagtcaat ctctgattcacaatatcaaagtgaaaatgcattacatgacagcgttagtaaagatcaaaataagaaaataagtgaaagtg aaaaggaacatgtgtctgctgccatagaaatggagaattcacatttagatggaggcattggaaaactgaaaaatgcagaa gcctcggagaatttaggagataaatctgtggaaggacacaatgatatacccaaaccagtaggcccagatggagggaggaa tgggaagaatattgtcagccgaaacgaagccattgaagaacaaaatggatggtatgaggatgaggcaaagagtagtaaaa aagatgacgaatcagaggaagagaagaatgagggaagtggtaaatcagagtggtatatggaaagagaagatgaagatgtg gaagaggaagttgaggaggaggaggaagaagatgcagatgtgaaaaaggcatatgaagtaacagcaaggcttaggaagct tactgaagaattgtttactctttatgaaatggagaaaaagaagtctgaggatgagggcgcagaggatcaagaagcacata aattcgaagttaatcatgttaaagataagtttaataaagtagctgatcagtacatggaagaactagagaaattatctaag ggacaaaaagtacccgaaagtgaagtacgggatgatatacaaaacttggaaaagaagatgcaacgtgtaggaagagatga tgttgatagcaaaaaatctggaaaagatgaaattgaaagtcaggatgaggatgaggaggaagattttataaagaaaattg attttgacactttccctgatccatatgatataaataacctggacatgaaggaggtagaggaaatatacaagaccacatat gacaacgtcaaagagaccaccattgtgtataaaccagacgaaaatgataaagtcatgtacgataaatatacacagactct gcttgaaaatggagctcttttcacagaatataacggcaagttccaaatggatgaagaagttgcggaggcactggctatca gtaaaacaactgatgttgataaggcaggtgaacaggaatctgtaaaggtggagaaagaagaggtgaaagaaatgacagct gaggaaaaacaaggaaattattaggcccaccagtactttgagatggccgcctcattgaaccacacccgagccctggagta tgtggccttttcctacatgattggggattacctcactcaggatgtggtcaaggccaaaaagatatttgaagatctggcag cgagaggatcaccacggggacaactgggtatgggttttatgaacagtgctggtataggtacaaactccagtcaagcaaaa gctttggtttatttcacttttgcgtcacttggcggagatcctttagcacagatggctttgggttaccgatattggtctgg tataggagtagagatgaagtgtgagactgcactaacatactacagaaaggctgcagcaaatgctgttaaaggggatgtac aagctcaagtggtgctgggacagttatacttccagggtggtagaggggtcatcataaaccatgagagagctttacactac tttctgatggccgctgaatctggaaatgccaatgcgtttgcatttcttggaaagatgtactcagaaggcagcccagctgt gtcccagaataatcagacagctctcacttacttcaagaaagctgccgacaaagggaatccagttggacagacaggtttgg gtatgctttatttgaatggaaaaggagttgataaggatctgactaaagcctttcgccagtttagtctagcagcagaccaa ggctgggcagagggacaactacgacttggacttatgtattacggtggaagaggtgtaaagagagactacaagatggctgt caagtattttaatctagcttcacaaggtggtcatgtcctagctttcttcaatctcgctcagatgcatgcaacagggaatg gagtgttgagaaactgccatacagctgtagagcttttcaagaatgttgcagagagaggaaagtggtcagaaatgttatcc gaggcatacaatctgtttaaggagggaaacatcaaccaagctctccttaaatacacgttcctggctgagctaggatacga ggtagcgcagtctaatgtggcctatctccttgatcaaggggatgttggcttatttgaagaaagagaagtctttgagcggg ctctgctccactggtccagggctgctgcccaaggctctaccatagctcgggtcaaaatgggggactaccattattatggt tacggtactaagatagactatgagacggcagcctctcactatagactggcatctgaacagcaacacaatgcacaggctat gttcaatctgggatatatgcatgaacagggactaggattgaaacaggatatccatctagccaaaagattttatgatatgg cagcggagaccagtatagatgcccatgtaccagttacattagcattatttaagcttgcatttctatatgggtcagagctg ttcaataaagagctggaagattacaagacatttttcaaaagatttgatctgcgattctaccttggacctgattgggatat atatttaatgacgtttttagcgcttttattaggacttataatattgttacgcagagtaaggtga |
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Protein
| Protein ID | pfu_aug2.0_48.1_26730.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26730.t1 METPNSPVCYNCFDKRRTLRQIWCLAFTLLIFTHSTYSQAPGHSSSKALNKEDTGQSSNKNAGTQKSNQINRGKGGNSEG IVNGKSSESLQSDSAQQSDNSVKSKSISDSQYQSENALHDSVSKDQNKKISESEKEHVSAAIEMENSHLDGGIGKLKNAE ASENLGDKSVEGHNDIPKPVGPDGGRNGKNIVSRNEAIEEQNGWYEDEAKSSKKDDESEEEKNEGSGKSEWYMEREDEDV EEEVEEEEEEDADVKKAYEVTARLRKLTEELFTLYEMEKKKSEDEGAEDQEAHKFEVNHVKDKFNKVADQYMEELEKLSK GQKVPESEVRDDIQNLEKKMQRVGRDDVDSKKSGKDEIESQDEDEEEDFIKKIDFDTFPDPYDINNLDMKEVEEIYKTTY DNVKETTIVYKPDENDKVMYDKYTQTLLENGALFTEYNGKFQMDEEVAEALAISKTTDVDKAGEQESVKVEKEEVKEMTA EEKQGNYXAHQYFEMAASLNHTRALEYVAFSYMIGDYLTQDVVKAKKIFEDLAARGSPRGQLGMGFMNSAGIGTNSSQAK ALVYFTFASLGGDPLAQMALGYRYWSGIGVEMKCETALTYYRKAAANAVKGDVQAQVVLGQLYFQGGRGVIINHERALHY FLMAAESGNANAFAFLGKMYSEGSPAVSQNNQTALTYFKKAADKGNPVGQTGLGMLYLNGKGVDKDLTKAFRQFSLAADQ GWAEGQLRLGLMYYGGRGVKRDYKMAVKYFNLASQGGHVLAFFNLAQMHATGNGVLRNCHTAVELFKNVAERGKWSEMLS EAYNLFKEGNINQALLKYTFLAELGYEVAQSNVAYLLDQGDVGLFEEREVFERALLHWSRAAAQGSTIARVKMGDYHYYG YGTKIDYETAASHYRLASEQQHNAQAMFNLGYMHEQGLGLKQDIHLAKRFYDMAAETSIDAHVPVTLALFKLAFLYGSEL FNKELEDYKTFFKRFDLRFYLGPDWDIYLMTFLALLLGLIILLRRVR |
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