Gene
| Gene Model ID | pfu_aug2.0_48.1_26733 |
|---|---|
| Locus | scaffold48.1 : 149185 ... 149975 : - |
| To GenomeBrowser | scaffold48.1:149185..149975 |
| Genes list of scaffold | scaffold48.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_48.1_26733.t1 | 1 | 1 | DUF296 | 11 | 56 | 5.4e-06 | 26.0 | 4.0e-10 | 5.9e-06 | 25.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_48.1_26733.t1 | gi|390342605|ref|XP_003725695.1| | PREDICTED: AT-hook motif nuclear-localized protein 6 [Strongylocentrotus purpuratus] | 3.0e-12 |
| pfu_aug2.0_48.1_26733.t1 | gi|591377109|ref|XP_007063219.1| | PREDICTED: uncharacterized protein LOC102940755 [Chelonia mydas] | 2.0e-10 |
| pfu_aug2.0_48.1_26733.t1 | gi|676431678|ref|XP_009046329.1| | hypothetical protein LOTGIDRAFT_110886 [Lottia gigantea] | 2.0e-10 |
| pfu_aug2.0_48.1_26733.t1 | gi|638253503|ref|NP_001279452.1| | uncharacterized LOC103181687 [Callorhinchus milii] | 8.0e-10 |
| pfu_aug2.0_48.1_26733.t1 | gi|260803918|ref|XP_002596836.1| | hypothetical protein BRAFLDRAFT_129099 [Branchiostoma floridae] | 1.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_48.1_26733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26733.t1 atgcagtcttttcagccgtgtgcattgaaatgttatccgttaagacttctccctggacaagatgtaaaggcagagttact gtcctttgtcgaggggcacaaactgcaggcggcgttcgtaatgacctgtgttggcagcatcaccagaggaaaaatacgaa tggctgacagtgtcacattctgctctgtgttagaaagctctttgttcgttgatgataatgtggattga |
|
Protein
| Protein ID | pfu_aug2.0_48.1_26733.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26733.t1 MQSFQPCALKCYPLRLLPGQDVKAELLSFVEGHKLQAAFVMTCVGSITRGKIRMADSVTFCSVLESSLFVDDNVD |
|