Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_48.1_26734
Locus scaffold48.1 : 169828 ... 174878 : -
To GenomeBrowser scaffold48.1:169828..174878
Genes list of scaffold scaffold48.1
Synonym pfu_aug1.0_73945.1_63791

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_48.1_26734.t1 1 1 7tm_1 31 104 8.8e-09 34.8 2.0e-12 1.0e-08 34.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_48.1_26734.t1 gi|591380977|ref|XP_007065026.1| PREDICTED: B2 bradykinin receptor [Chelonia mydas] 2.0e-08

Transcript
Transcript IDpfu_aug2.0_48.1_26734.t1
Definition-
>pfu_aug2.0_48.1_26734.t1
atggctgatcaacgaggtgacattcaagncccaagaagtatttcaagttcaagcagcaaaggatctagaaatccaagatt
atacaagagaagtaaatcaataaaagagaaagccaacataaaacgtgcaaatgccgtatttgcgtctataactttcgtct
ttgtcttgagttatcttccgtttttgttactagagatactgaaacaagttggcgtgatttcagatgaccttaacaatagg
acagaacagtctgtctttgaactcttcacaaaaacaatgtacctcaataatgtcatcaatccttttatctatggcatcct
taattcttctttcagagatgaaattaaatgcctcttcacaggaaagatcccaaaacgaagaaattctggtagttctaggc
gaaaaatctaa

Protein
Protein IDpfu_aug2.0_48.1_26734.t1
Definition-
>pfu_aug2.0_48.1_26734.t1
MADQRGDIQXPRSISSSSSKGSRNPRLYKRSKSIKEKANIKRANAVFASITFVFVLSYLPFLLLEILKQVGVISDDLNNR
TEQSVFELFTKTMYLNNVINPFIYGILNSSFRDEIKCLFTGKIPKRRNSGSSRRKI

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495