Gene
Gene Model ID | pfu_aug2.0_48.1_26735 |
---|---|
Locus | scaffold48.1 : 177587 ... 188688 : - |
To GenomeBrowser | scaffold48.1:177587..188688 |
Genes list of scaffold | scaffold48.1 |
Synonym | pfu_aug1.0_5111.1_67166 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_48.1_26735.t1 | 1 | 1 | Flavodoxin_2 | 12 | 221 | 5.5001e-42 | 143.5 | 1.4013e-45 | 6.69961e-42 | 143.2 |
pfu_aug2.0_48.1_26735.t1 | 1 | 1 | FMN_red | 12 | 162 | 1.0e-11 | 44.5 | 3.1e-15 | 1.5e-11 | 44.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_48.1_26735.t1 | gi|612008645|ref|XP_001378611.2| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] [Monodelphis domestica] | 0.0 |
pfu_aug2.0_48.1_26735.t1 | gi|602634100|ref|XP_007423924.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X1 [Python bivittatus] | 0.0 |
pfu_aug2.0_48.1_26735.t1 | gi|640821471|ref|XP_008067686.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] [Tarsius syrichta] | 0.0 |
pfu_aug2.0_48.1_26735.t1 | gi|395512062|ref|XP_003760266.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone]-like [Sarcophilus harrisii] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_48.1_26735.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26735.t1 atgaactccacatgctcgggttccagaccacgacgagtcttgattgtattcgcccatcccgacaagcgctcctttaatgg tgctctgctacaaacagctatacacagcctagagagtaagggatgtcaagtcgaggtatcagacctccatcaacagaact tcgatcctagggacaatataagtgacgtaaaactggatacagataatgatgtagcattcaactatagtgttgaaagtgga aaagcatacaggtcaggcaaactgtccgaagaaagaaacacagagattgataaagtgaaacgtgccgatctggtggtgtt ccagttccctttgtactggtcagctgctccggccatcttaaaaggatggatggacaaagtgcttatcgatggattcgctg ctgatttcgagaaagggaaaattttagataaaggtcttatgaaggataaaactgctgtcttgtcaataactacaggtggt agtagagcgaccttatcgtctttcggtctttttggggatataaacgtcttactatggccattacagtatggaactttgcg catgtgtggttttaatgttctaagacctcaactttcttgtgaaacattatttgtaagtgaagacaaaagaaaggaatatc tagcaagctgggagagcagactttgtagtatatttgatgaggaaccattgtcttttccatctgttaatgaatttgatacc aaagaaacatggacactaacagaggagtctagagaaaagtatagtaagagtggaacaataccctcggttgttcatcacat gggaacgctcgatgtaggacaaacatttgaaattaagaagacaggtgattag |
Protein
Protein ID | pfu_aug2.0_48.1_26735.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26735.t1 MNSTCSGSRPRRVLIVFAHPDKRSFNGALLQTAIHSLESKGCQVEVSDLHQQNFDPRDNISDVKLDTDNDVAFNYSVESG KAYRSGKLSEERNTEIDKVKRADLVVFQFPLYWSAAPAILKGWMDKVLIDGFAADFEKGKILDKGLMKDKTAVLSITTGG SRATLSSFGLFGDINVLLWPLQYGTLRMCGFNVLRPQLSCETLFVSEDKRKEYLASWESRLCSIFDEEPLSFPSVNEFDT KETWTLTEESREKYSKSGTIPSVVHHMGTLDVGQTFEIKKTGD |