Gene
| Gene Model ID | pfu_aug2.0_48.1_26737 |
|---|---|
| Locus | scaffold48.1 : 199313 ... 206098 : - |
| To GenomeBrowser | scaffold48.1:199313..206098 |
| Genes list of scaffold | scaffold48.1 |
| Synonym | pfu_aug1.0_21813.1_18825 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_48.1_26737.t1 | 2 | 1 | TMEM173 | 19 | 142 | 9.3e-26 | 90.3 | 8.9e-14 | 6.6e-10 | 38.2 |
| pfu_aug2.0_48.1_26737.t1 | 2 | 2 | TMEM173 | 301 | 470 | 9.3e-26 | 90.3 | 1.7e-17 | 1.3e-13 | 50.4 |
Transcript
| Transcript ID | pfu_aug2.0_48.1_26737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26737.t1 atgattcaagagaccgatgtgtacaaatcaaatggatcttgtttccctattgtcctatacgagctgattcctgaggactg cagacttggtctactcccgtctaaaggatccaatgggaacataacatatgtcgctagtaccaaactaaagatcaccaatc gtgctggaaatgaacgggaatacgaactcagaatatttagcttaaaagaccaaaacgatggaaaggaatacttctttatt gcggatcaacccttcgtcctaaacactttccggcatgtagaagatgataatggagaggacgaagaaaccactcaacgtaa ccttaatctaaatgtagccagattttgctacacaatgcaaatgattctagaccatccagagatgaagaaacaatggaaag gcaacagagcacggcttgtccagtactgtgagattgattggtgcaacagcggattatatcgcgaagagcagagctatgat tatgatgcatatatctgtgcgttcaaggaagatatagaggaagaaaagaagattacagaatttctgaaaaggcatgatgt ctccgttgcagaaggtagaagtgcaaatatgttaggcaacacacatttgatcgggaaatctagatggttaattttcctat tgagcaaggccgccatgcatgatcctgaatttacgctggagtggcttggaacattgcaggaggtcctaaataaagggcac actctggttgtaccagttatactggaggaagatagagaatacggaattcccgaggtactacgatgggtgacttacatcca gaagatggaaggtgaccaggacaactacatgcaaaggattttgaaaactatacaaggtggtcctgttcccatggacatca agtcatacctacctgctggtaatgtcgcctatggactagctcttggttacgtgaagaactacttgaatctcattttacaa gatttaaatagtgcattcaacaaatgcagtgaaccatgtcaacgacatttttacattcttctgccacgatcctgtaagtg caaaaataccctggaagaggagaacgatcattgcatagtcaccaaacacgatacaattctcctttatactgctccgaatg gaaggaaatactcatgtgatatgtacaagttggtttctggacaaggccgaaataagattgactatatccttggactgtac gcagcaccagttctctgtctataccagatgataatgatccacataggaggacttaaggaggaagagatgtacaaacagag acaagagtttagtaccatattgtacggaatgctccatacacagctgggggataaggcaaacctttgtcgctttgttgaat ttgatgattccaagatgacggcgggacaggccatcctggatgctatcaaaagagaaggacagaattga |
|
Protein
| Protein ID | pfu_aug2.0_48.1_26737.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26737.t1 MIQETDVYKSNGSCFPIVLYELIPEDCRLGLLPSKGSNGNITYVASTKLKITNRAGNEREYELRIFSLKDQNDGKEYFFI ADQPFVLNTFRHVEDDNGEDEETTQRNLNLNVARFCYTMQMILDHPEMKKQWKGNRARLVQYCEIDWCNSGLYREEQSYD YDAYICAFKEDIEEEKKITEFLKRHDVSVAEGRSANMLGNTHLIGKSRWLIFLLSKAAMHDPEFTLEWLGTLQEVLNKGH TLVVPVILEEDREYGIPEVLRWVTYIQKMEGDQDNYMQRILKTIQGGPVPMDIKSYLPAGNVAYGLALGYVKNYLNLILQ DLNSAFNKCSEPCQRHFYILLPRSCKCKNTLEEENDHCIVTKHDTILLYTAPNGRKYSCDMYKLVSGQGRNKIDYILGLY AAPVLCLYQMIMIHIGGLKEEEMYKQRQEFSTILYGMLHTQLGDKANLCRFVEFDDSKMTAGQAILDAIKREGQN |
|