Gene
| Gene Model ID | pfu_aug2.0_48.1_26739 |
|---|---|
| Locus | scaffold48.1 : 228000 ... 230248 : - |
| To GenomeBrowser | scaffold48.1:228000..230248 |
| Genes list of scaffold | scaffold48.1 |
| Synonym | pfu_aug1.0_266069.1_43115 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_48.1_26739.t1 | 2 | 1 | Glyco_transf_49 | 70 | 262 | 0.0 | 302.0 | 4.30002e-41 | 1.3e-37 | 129.6 |
| pfu_aug2.0_48.1_26739.t1 | 2 | 2 | Glyco_transf_49 | 246 | 431 | 0.0 | 302.0 | 0.0 | 0.0 | 179.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_48.1_26739.t1 | gi|391325616|ref|XP_003737327.1| | PREDICTED: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_48.1_26739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26739.t1 atgaagtcaaatttgaacaaaaatggtaaagtacgaaacaaagaccatggagtggaaggattaggacaaagtagtagtga agctatcaaaatgataattagtggaataattaataaactacagaatgtgcatatgttagacagaagtgggacatatggga ttgctcctgatttgtatgcaccatactacatcaaaagtacagaggatatatctgtggttacgcacaccacatctgagcac atggaggatctgattttactgagtgagagatgggatggacccatgtctgtgtctgtgtttacttacgatgttgacgccta tttcaccatagctgccattgcttatctttgtgtttgctttgaaaaagtccgtattaacactcaatttcatattgcatttc cattaagccatagtccaagaaactctgatgtaaaagatcttgatattagttgtaacatgaaattgaaggactttcttcac aatagaacgcgcaattatgaaataaaaggactggaatatcctcataacatgttacgcaaccttgctatccaacactctaa aacatcgtatattttcatgatagacattgatatggttccatcttccagccttcatcaggattttgtggactttcttcatc atcatcgtcatcttccatctagtaacgatctagcaaatactgtgtttgtggtcccagcttttgaatgttccagtgaagaa ttccccttctctaaagatgtagtgataagtttgtgccttcatcaggattttgtggactttcttcatcatcatcgtcatct tccatctagtaacgatctagcaaatactgtgtttgtggtcccagcttttgaatgttccagtgaagaattccccttctcta aagatgtagtgataagtttgtggtcttatggtgttatccgtccattttatattgagatgtgcaaaaagtgtcaaaagtac actgactatgataggtggaggaagttagaagaggaggaggatttagacattggttatgaattggaatggagggatccatg ggaaccattttacattgcaagtagggatgtaccactctttgatgaaagattcaagcagtatggctttaacagaatcagtc aagcttgtgagctccatgtagcaggatacaagtttgctgtcctcaacaatgccttccttcttcacaagggattcaaacaa cctcacaaattccatgaaactaaagaagaagagcaaaataggaatagactgctgtttagaaaatttaaggaagaactgaa aacaaagtatccaaattcacaacagagatgctattga |
|
Protein
| Protein ID | pfu_aug2.0_48.1_26739.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26739.t1 MKSNLNKNGKVRNKDHGVEGLGQSSSEAIKMIISGIINKLQNVHMLDRSGTYGIAPDLYAPYYIKSTEDISVVTHTTSEH MEDLILLSERWDGPMSVSVFTYDVDAYFTIAAIAYLCVCFEKVRINTQFHIAFPLSHSPRNSDVKDLDISCNMKLKDFLH NRTRNYEIKGLEYPHNMLRNLAIQHSKTSYIFMIDIDMVPSSSLHQDFVDFLHHHRHLPSSNDLANTVFVVPAFECSSEE FPFSKDVVISLCLHQDFVDFLHHHRHLPSSNDLANTVFVVPAFECSSEEFPFSKDVVISLWSYGVIRPFYIEMCKKCQKY TDYDRWRKLEEEEDLDIGYELEWRDPWEPFYIASRDVPLFDERFKQYGFNRISQACELHVAGYKFAVLNNAFLLHKGFKQ PHKFHETKEEEQNRNRLLFRKFKEELKTKYPNSQQRCY |
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