Gene
| Gene Model ID | pfu_aug2.0_48.1_26746 |
|---|---|
| Locus | scaffold48.1 : 338284 ... 371025 : - |
| To GenomeBrowser | scaffold48.1:338284..371025 |
| Genes list of scaffold | scaffold48.1 |
| Synonym | pfu_aug1.0_3427.1_44661 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_48.1_26746.t1 | 2 | 1 | Na_H_Exchanger | 16 | 61 | 0.0 | 237.1 | 4.6e-06 | 0.034 | 12.6 |
| pfu_aug2.0_48.1_26746.t1 | 2 | 2 | Na_H_Exchanger | 168 | 533 | 0.0 | 237.1 | 0.0 | 0.0 | 228.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_48.1_26746.t1 | gi|676444143|ref|XP_009050332.1| | hypothetical protein LOTGIDRAFT_81744, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_48.1_26746.t1 | gi|524899301|ref|XP_005106085.1| | PREDICTED: sodium/hydrogen exchanger 6-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_48.1_26746.t1 | gi|241609865|ref|XP_002406848.1| | sodium/proton exchanger, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_48.1_26746.t1 | gi|571552308|ref|XP_006562118.1| | PREDICTED: sodium/hydrogen exchanger 7 isoform X9 [Apis mellifera] | 0.0 |
| pfu_aug2.0_48.1_26746.t1 | gi|572268161|ref|XP_006612138.1| | PREDICTED: sodium/hydrogen exchanger 7-like isoform X7 [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_48.1_26746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26746.t1 atgcagacatcactagcaacatacttctcagaacacaaaagtttacgaggtgctatagcatttgccctgtcaatccgtaa cacagctacggaggcacgaaagctgatggtatcggccactatgtttatagtgttagtaacagttatattctgtggaggct ttaccacacccatgctacagtggttacaaatcagagttggtgtagaagaagatagagaaatgacaaatcttgctgctgtg ccatcagtaagtatgataattggagtcattataaggtacaccagtaagtcatcaaatgaaagtgccatagctgtcctagt caatagttcctacactgcacagaatgccccaccctctatatttgtggagctgcctacgtcattacccaagaacatgtcgg gaaccaatggtactgctcatgtcaacacaaaaacgatacaatataacctttggggagaggcagaggatgagaaggagtta tcaccccttgtcacggctgtgacttttgatccagagcttttctttaatgtgttattgccatttatcatatttgaagctgg atatagtatgaagaggcgacacttcttcagaaacttaggagccattatgacttatgcatttattggaacgaccatttcct gttttgttgttggtggaatcatgtatggactgacccgtttcatgtcggtttcattcaaactgaatgattgtttctttttt ggagccattatctcagccactgatccagtgacggtacttgctatatttagtgatctgaaggtagatgttgacctttttgc ccttgtgtttggagaaagtgtacttaatgatgcagttgctatagttttatcaggatctgttgagaagtatggaaagttgt ctacaggaggttttaatgtatcagctttcttttcttcgtttggaaactttgttggtatatttgctggtgcctttgccatt ggatctgccataggatgtgtaaatgctctgattgagtatttcaaaaataaaattgttttccttaattctgcatacattac taagtatacaaagataggagactttcccttgctggagacagcattgtttttcctcatgtcatacagttcattccaggctg cagaggctgctggtcttacaggaattgttgctgttttattttgtggcattactcaagctcattacacatacaacaattta tcgaaagaatcaaaggagaggacaaagcagctttttgagttgatgaatttcctggcagagaattttgtattcctgtacat tggtgtagctgtatttacatttcattcccagcactggcatccaggatttatcttctcagctttttttgccatcattgtcg ctaggttttgtaatatttacccactttctcttttactcaatctcgggaggaaaaacaaaatcaaatattcattcatgcat atgatgatgttttctggtttacgaggtgctatagcatttgccctgtcaatccgtaacacagctacagaggctcgaaagct gatggtatcggccactatgtttatagtgttagtaacagttatattctgtggaggcttcaccacacccatgttacagtggt tacaaatcagagttggtgtagaagaagatagagaaatgacaaatcttgctgctgtgccatcaacaagccaagatgatgtg aaagtcaaaaataaagaaaaagcttattttgttggaaaatggcataactttgatgtcaggtttatgaagcctttactgac taacagtcgaccatcattgatggaaacattaccagctttttgcctaccactagccaaacttcttaccacggaggaacaat tatctcagggtgaaggccacatagatgatgattctgatacagacatgataatagatcaccgtgagctgtctataggagag aactcttacagccgtggaaataccagcacggctacaaatcctaaaggattcactgaggttgatttagaacatacaaactc taagcaggtaaaggtagatgttgcaatagaaaacccaccaagattgcatcaagagtcctcatggtcaagtgatgaccttc cattgaccccttga |
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Protein
| Protein ID | pfu_aug2.0_48.1_26746.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_48.1_26746.t1 MQTSLATYFSEHKSLRGAIAFALSIRNTATEARKLMVSATMFIVLVTVIFCGGFTTPMLQWLQIRVGVEEDREMTNLAAV PSVSMIIGVIIRYTSKSSNESAIAVLVNSSYTAQNAPPSIFVELPTSLPKNMSGTNGTAHVNTKTIQYNLWGEAEDEKEL SPLVTAVTFDPELFFNVLLPFIIFEAGYSMKRRHFFRNLGAIMTYAFIGTTISCFVVGGIMYGLTRFMSVSFKLNDCFFF GAIISATDPVTVLAIFSDLKVDVDLFALVFGESVLNDAVAIVLSGSVEKYGKLSTGGFNVSAFFSSFGNFVGIFAGAFAI GSAIGCVNALIEYFKNKIVFLNSAYITKYTKIGDFPLLETALFFLMSYSSFQAAEAAGLTGIVAVLFCGITQAHYTYNNL SKESKERTKQLFELMNFLAENFVFLYIGVAVFTFHSQHWHPGFIFSAFFAIIVARFCNIYPLSLLLNLGRKNKIKYSFMH MMMFSGLRGAIAFALSIRNTATEARKLMVSATMFIVLVTVIFCGGFTTPMLQWLQIRVGVEEDREMTNLAAVPSTSQDDV KVKNKEKAYFVGKWHNFDVRFMKPLLTNSRPSLMETLPAFCLPLAKLLTTEEQLSQGEGHIDDDSDTDMIIDHRELSIGE NSYSRGNTSTATNPKGFTEVDLEHTNSKQVKVDVAIENPPRLHQESSWSSDDLPLTP |
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