Gene
Gene Model ID | pfu_aug2.0_48.1_26747 |
---|---|
Locus | scaffold48.1 : 371072 ... 432875 : - |
To GenomeBrowser | scaffold48.1:371072..432875 |
Genes list of scaffold | scaffold48.1 |
Synonym | pfu_aug1.0_42101.1_05204 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_48.1_26747.t1 | 1 | 1 | JAB | 53 | 133 | 2.5e-12 | 46.5 | 5.4e-16 | 4.0e-12 | 45.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_48.1_26747.t1 | gi|242005763|ref|XP_002423731.1| | COP9 signalosome complex subunit, putative [Pediculus humanus corporis] | 0.0 |
pfu_aug2.0_48.1_26747.t1 | gi|390361934|ref|XP_797139.3| | PREDICTED: COP9 signalosome complex subunit 6 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
pfu_aug2.0_48.1_26747.t1 | gi|241564313|ref|XP_002401875.1| | COP9 signalosome, subunit CSN6, putative [Ixodes scapularis] | 0.0 |
pfu_aug2.0_48.1_26747.t1 | gi|573878218|ref|XP_006627342.1| | PREDICTED: COP9 signalosome complex subunit 6-like [Lepisosteus oculatus] | 0.0 |
pfu_aug2.0_48.1_26747.t1 | gi|91094221|ref|XP_973281.1| | PREDICTED: COP9 signalosome complex subunit 6 [Tribolium castaneum] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_48.1_26747.t1 |
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Definition | - |
>pfu_aug2.0_48.1_26747.t1 atgtgtaaaagacttctgacaaattttcatgtcattatttcaaccccaagtccctttaaaatgcagcaggcggtaactgg tgctgggcagccactggtcctcgaccagtccggaaagagggagggttttgatattataggggaaattggggttgtacaca ttttgggtgccctcattggaaaacaaaagggaaggaagatagaggtgatgaattcctttgagcttgtatttgattttgtg gagaatgaaatcataataaacatggagtactataccaagaaggaaggacaatttaagcaggttttcagtgacctagattt tctaggatggtacaccactggggaacagccaactttctcagatattaaagttcacaaacagatctgccagatcaacgaga gtccaatatttttgaaaatgaatcccttagccagacagacagaccttcctgttgcaatatatgaatcagtaatagatctc gtgaacaaagaggctaccatgttatttattgagctccagtacactctggctacagaggaggcagagaggataggagtgga ccacgtagccagggtgtccacatcagagagtggagaaggctctgctgtattaaggaatattatatgtaaaatctttgagc agaatatctttggccttaaagtgccacaatgcaatgatgtatgtttgatgtcttacctgggaacaataacaaaaggatgt aactcaataaatcagtttgtgaataaattcaatgtgatgtatgacagacaaggaatgggaaggagaatgaggggactttt cttctga |
Protein
Protein ID | pfu_aug2.0_48.1_26747.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26747.t1 MCKRLLTNFHVIISTPSPFKMQQAVTGAGQPLVLDQSGKREGFDIIGEIGVVHILGALIGKQKGRKIEVMNSFELVFDFV ENEIIINMEYYTKKEGQFKQVFSDLDFLGWYTTGEQPTFSDIKVHKQICQINESPIFLKMNPLARQTDLPVAIYESVIDL VNKEATMLFIELQYTLATEEAERIGVDHVARVSTSESGEGSAVLRNIICKIFEQNIFGLKVPQCNDVCLMSYLGTITKGC NSINQFVNKFNVMYDRQGMGRRMRGLFF |