Gene
Gene Model ID | pfu_aug2.0_48.1_26749 |
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Locus | scaffold48.1 : 538181 ... 606044 : - |
To GenomeBrowser | scaffold48.1:538181..606044 |
Genes list of scaffold | scaffold48.1 |
Synonym | pfu_aug1.0_10833.1_10215 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_48.1_26749.t1 | 1 | 1 | Nucleoplasmin | 397 | 479 | 5.0e-15 | 55.3 | 5.0e-18 | 1.1e-14 | 54.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_48.1_26749.t1 | gi|667254326|ref|XP_008565143.1| | PREDICTED: transient receptor potential cation channel subfamily M member 7 [Galeopterus variegatus] | 0.0 |
pfu_aug2.0_48.1_26749.t1 | gi|594110002|ref|XP_006077845.1| | PREDICTED: transient receptor potential cation channel subfamily M member 7 isoform X2 [Bubalus bubalis] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_48.1_26749.t1 |
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Definition | - |
>pfu_aug2.0_48.1_26749.t1 tccatagattacctaccgaccgttcggtacagaatttatggagaagagaggaaatgtgaagcgttcctggatccccatca cactcattaccttctggtggatgacggaacgcagcataaatacggtgtcgagattccgttcagggccaagctagagcagg ctatatcctgtagtaccatgctcacatctagcttacggtgtcaagaatctatgtcagtacctgtagttcagcttgtatta gagggaggaccaaggactctgtacactgttagtgagacgctagaaaatgggattcctgtagttgttgtcaaggacagcgg tcgtatcagtgatgtactgtatcatgtctacaaggcaacaagtgataaaaatgaatttactgaagatctgaagaaaagcg cagagacaatgctgagaacctttctgaatagagataaagatgtcctggagtgcctaactctgttagagaagtgccttgaa caccgagatctgatcactgattgtgaacttgtggatgagtcagctggcatagatgtccctattcttcatgccctgatgaa aagtaagaagaacaatgtgtttgagcagttaagcttgaccctggcctggaatagagtggacgtagctaaatctgaagtgt tcggacagaagaaatacattcagctgtccaacttaaataacataatgttactggcccttaaggagggaatggccgacttt gtagagctgctgatagataatggactcgtcatagaatcctttatggagaataacagactggaggaattattcagctttga tatgtgtgcaggaaaccacatgctcgtcagaatgttgcgtcaagtcaagaaaaagtttggatcgaaagagaagaaggcgt ctatatttgacatccggcgtcttctacagtccctcattgatttagggatagttacaaaaggcaaactgaaaaagacagat aaagctgttgtggtcatagattccagcagtaacaaagcctatctttccctgtttatatggtctatattgatgaactatca ggaccttgccaagctattctggatacgaggagagaatcccatacccacggccttgcttggttatggacttctcagagcta taggaaaacaagcttttgaccctgagtataaaaacaggcttttatcgtatgccaaaaatatgttgaaattgaaattttgc tgccaggagtgcaatctagatgtgagttttggtcatgaagttcctgtgatatttcgactgactgagggttcaggtcctgt ccatatttcggctcaacagttagtagaatttcctgacgatgctataaatactagtcaagacgattctgagttagagtgta cggagacggaggaagagacccaggaggaaagcgaggaagaggaggaggaggaagaaacatcacctaaaaaggacgcaaag tcaaagaaacggaaagcatctatacaaaaagcttcaaagtctaagcaaaaagaaagccaccaagaaaagcaaggaaaaag aaggcaaggcagcagggaaaaagcttaa |
Protein
Protein ID | pfu_aug2.0_48.1_26749.t1 |
---|---|
Definition | - |
>pfu_aug2.0_48.1_26749.t1 SIDYLPTVRYRIYGEERKCEAFLDPHHTHYLLVDDGTQHKYGVEIPFRAKLEQAISCSTMLTSSLRCQESMSVPVVQLVL EGGPRTLYTVSETLENGIPVVVVKDSGRISDVLYHVYKATSDKNEFTEDLKKSAETMLRTFLNRDKDVLECLTLLEKCLE HRDLITDCELVDESAGIDVPILHALMKSKKNNVFEQLSLTLAWNRVDVAKSEVFGQKKYIQLSNLNNIMLLALKEGMADF VELLIDNGLVIESFMENNRLEELFSFDMCAGNHMLVRMLRQVKKKFGSKEKKASIFDIRRLLQSLIDLGIVTKGKLKKTD KAVVVIDSSSNKAYLSLFIWSILMNYQDLAKLFWIRGENPIPTALLGYGLLRAIGKQAFDPEYKNRLLSYAKNMLKLKFC CQECNLDVSFGHEVPVIFRLTEGSGPVHISAQQLVEFPDDAINTSQDDSELECTETEEETQEESEEEEEEEETSPKKDAK SKKRKASIQKASKSKQKESHQEKQGKRRQGSREKA |