Gene
| Gene Model ID | pfu_aug2.0_480.1_00797 |
|---|---|
| Locus | scaffold480.1 : 20976 ... 30880 : + |
| To GenomeBrowser | scaffold480.1:20976..30880 |
| Genes list of scaffold | scaffold480.1 |
| Synonym | pfu_aug1.0_1508.1_07986 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| l-xylulose reductase | GO:0008152 GO:0016491 GO:0043226 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_480.1_00797.t1 | 2 | 1 | adh_short_C2 | 6 | 176 | 5.2e-23 | 82.0 | 2.4e-22 | 5.9e-19 | 68.7 |
| pfu_aug2.0_480.1_00797.t1 | 1 | 1 | adh_short | 7 | 156 | 3.8e-27 | 95.2 | 2.3e-30 | 5.7e-27 | 94.6 |
| pfu_aug2.0_480.1_00797.t1 | 1 | 1 | KR | 8 | 151 | 5.9e-11 | 42.3 | 3.3e-14 | 8.1e-11 | 41.9 |
| pfu_aug2.0_480.1_00797.t1 | 2 | 1 | Epimerase | 9 | 128 | 1.8e-06 | 27.5 | 2.1e-09 | 5.2e-06 | 26.0 |
| pfu_aug2.0_480.1_00797.t1 | 2 | 2 | Epimerase | 246 | 263 | 1.8e-06 | 27.5 | 0.8 | 2000.0 | -2.1 |
| pfu_aug2.0_480.1_00797.t1 | 2 | 2 | adh_short_C2 | 249 | 278 | 5.2e-23 | 82.0 | 6.6e-05 | 0.16 | 11.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_480.1_00797.t1 | gi|524874171|ref|XP_005093825.1| | PREDICTED: L-xylulose reductase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_480.1_00797.t1 | gi|573894905|ref|XP_006635201.1| | PREDICTED: L-xylulose reductase-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_480.1_00797.t1 | gi|327265093|ref|XP_003217343.1| | PREDICTED: L-xylulose reductase [Anolis carolinensis] | 0.0 |
| pfu_aug2.0_480.1_00797.t1 | gi|260801355|ref|XP_002595561.1| | hypothetical protein BRAFLDRAFT_200527 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_480.1_00797.t1 | gi|291222369|ref|XP_002731193.1| | PREDICTED: L-xylulose reductase-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_480.1_00797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00797.t1 atgcaaaatcgtaaacgaagaggaattggcagagctatagcaaagaaattaagtgaatgtggagccgagacgatagctct cagtaggacacaagcagacttagatagtcttaaggcagagaattctaatatccatactgtgcaatgtgatctaggagact gggattcaacaaggaaagtggtagaatcacttggacgtattgatctcctggttaacaatgctggggtttcccgactcgat acgtttctgaatttcaagaaagaagacctggactttgtctatgatataaacataaaagcagtcatcaatgttagccaagt ggtggccaagggtatggtagagagaggtaacggaggggctgttgtaaacatatctagtacagcctccaccagggccttaa ctgatcacatggcgtactgctccagtaaggcagctgtggacatgatcaccaaaatcatggctttggagcttggacctcat aaaatccgggttaattctgtaaatcctacagtgacatggacagacatggcacagtacgcatggagcgatccagcaaagtc aggtccaatgttagccaaaattcctatgggaaattgtgcacctgatattttgtgtgagcccctgatccccaggatctggg aaaatggatgtcactttagtgaatttaacgtaacagccagtagagcttcagtctcatcagagactcctggtaacaattac aaaatattcaaatttgaattggttgaagatgtggtaaattcagtcctgttcttgttgagtgacaagagtgctataaccaa tggtgcccacatggtacttgatggaggtttgagtgtggcctga |
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Protein
| Protein ID | pfu_aug2.0_480.1_00797.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00797.t1 MQNRKRRGIGRAIAKKLSECGAETIALSRTQADLDSLKAENSNIHTVQCDLGDWDSTRKVVESLGRIDLLVNNAGVSRLD TFLNFKKEDLDFVYDINIKAVINVSQVVAKGMVERGNGGAVVNISSTASTRALTDHMAYCSSKAAVDMITKIMALELGPH KIRVNSVNPTVTWTDMAQYAWSDPAKSGPMLAKIPMGNCAPDILCEPLIPRIWENGCHFSEFNVTASRASVSSETPGNNY KIFKFELVEDVVNSVLFLLSDKSAITNGAHMVLDGGLSVA |
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