Gene
| Gene Model ID | pfu_aug2.0_480.1_00803 |
|---|---|
| Locus | scaffold480.1 : 208804 ... 221108 : + |
| To GenomeBrowser | scaffold480.1:208804..221108 |
| Genes list of scaffold | scaffold480.1 |
| Synonym | pfu_aug1.0_256221.1_35913 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_480.1_00803.t1 | 7 | 1 | zf-H2C2_2 | 227 | 241 | 9.5e-24 | 82.4 | 0.00041 | 0.5 | 10.7 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 1 | zf-C2H2 | 231 | 253 | 4.2e-22 | 77.1 | 4.1e-06 | 0.005 | 17.0 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 1 | zf-C2H2_jaz | 231 | 256 | 5.1e-11 | 42.3 | 0.014 | 18.0 | 5.6 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 1 | zf-met | 231 | 250 | 1.8e-07 | 31.0 | 0.0062 | 7.6 | 6.8 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 1 | zf-C2H2_4 | 232 | 253 | 8.4e-18 | 63.3 | 0.0011 | 1.3 | 9.5 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 2 | zf-H2C2_2 | 246 | 266 | 9.5e-24 | 82.4 | 0.00069 | 0.86 | 10.0 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 2 | zf-C2H2_jaz | 259 | 283 | 5.1e-11 | 42.3 | 0.045 | 56.0 | 4.0 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 2 | zf-C2H2 | 260 | 282 | 4.2e-22 | 77.1 | 2.2e-05 | 0.028 | 14.7 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 2 | zf-C2H2_4 | 260 | 282 | 8.4e-18 | 63.3 | 6.6e-05 | 0.082 | 13.2 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 2 | zf-met | 260 | 265 | 1.8e-07 | 31.0 | 2.0 | 2500.0 | -1.1 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 3 | zf-H2C2_2 | 275 | 303 | 9.5e-24 | 82.4 | 1.6e-06 | 0.002 | 18.3 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 3 | zf-C2H2 | 292 | 314 | 4.2e-22 | 77.1 | 0.00042 | 0.51 | 10.7 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 3 | zf-C2H2_4 | 292 | 314 | 8.4e-18 | 63.3 | 7.5e-05 | 0.093 | 13.1 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 3 | zf-C2H2_jaz | 292 | 314 | 5.1e-11 | 42.3 | 9.3e-08 | 0.00012 | 22.1 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 3 | zf-met | 292 | 314 | 1.8e-07 | 31.0 | 8.2e-06 | 0.01 | 16.0 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 4 | zf-H2C2_2 | 309 | 331 | 9.5e-24 | 82.4 | 1.3e-05 | 0.016 | 15.5 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 4 | zf-C2H2 | 320 | 342 | 4.2e-22 | 77.1 | 2.4e-06 | 0.003 | 17.8 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 4 | zf-C2H2_4 | 320 | 342 | 8.4e-18 | 63.3 | 4.6e-08 | 5.6e-05 | 23.1 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 4 | zf-C2H2_jaz | 320 | 340 | 5.1e-11 | 42.3 | 0.021 | 26.0 | 5.1 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 4 | zf-met | 320 | 340 | 1.8e-07 | 31.0 | 0.0012 | 1.5 | 9.1 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 5 | zf-H2C2_2 | 334 | 358 | 9.5e-24 | 82.4 | 1.4e-07 | 0.00017 | 21.7 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 5 | zf-C2H2_jaz | 346 | 367 | 5.1e-11 | 42.3 | 8.0e-07 | 0.00099 | 19.1 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 5 | zf-C2H2 | 347 | 369 | 4.2e-22 | 77.1 | 3.1e-08 | 3.9e-05 | 23.7 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 5 | zf-C2H2_4 | 347 | 369 | 8.4e-18 | 63.3 | 4.7e-05 | 0.058 | 13.7 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 5 | zf-met | 347 | 367 | 1.8e-07 | 31.0 | 2.9e-06 | 0.0036 | 17.4 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 6 | zf-H2C2_2 | 361 | 384 | 9.5e-24 | 82.4 | 3.8e-07 | 0.00047 | 20.3 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 6 | zf-C2H2 | 379 | 396 | 4.2e-22 | 77.1 | 0.0034 | 4.2 | 7.9 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 6 | zf-C2H2_4 | 379 | 396 | 8.4e-18 | 63.3 | 0.025 | 31.0 | 5.1 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 7 | zf-H2C2_2 | 409 | 426 | 9.5e-24 | 82.4 | 0.005 | 6.1 | 7.3 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 7 | zf-C2H2 | 415 | 437 | 4.2e-22 | 77.1 | 5.8e-05 | 0.071 | 13.4 |
| pfu_aug2.0_480.1_00803.t1 | 7 | 7 | zf-C2H2_4 | 415 | 437 | 8.4e-18 | 63.3 | 6.8e-05 | 0.084 | 13.2 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 6 | zf-C2H2_jaz | 415 | 433 | 5.1e-11 | 42.3 | 0.0057 | 7.1 | 6.9 |
| pfu_aug2.0_480.1_00803.t1 | 6 | 6 | zf-met | 415 | 433 | 1.8e-07 | 31.0 | 0.024 | 30.0 | 5.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_480.1_00803.t1 | gi|676486736|ref|XP_009064069.1| | hypothetical protein LOTGIDRAFT_73074, partial [Lottia gigantea] | 8.40779e-45 |
| pfu_aug2.0_480.1_00803.t1 | gi|524917587|ref|XP_005113545.1| | PREDICTED: uncharacterized protein LOC101851472, partial [Aplysia californica] | 1.0e-32 |
| pfu_aug2.0_480.1_00803.t1 | gi|591326666|ref|XP_007089302.1| | PREDICTED: zinc finger protein 596-like [Panthera tigris altaica] | 3.0e-31 |
| pfu_aug2.0_480.1_00803.t1 | gi|499037679|ref|XP_004569486.1| | 3.0e-30 | |
| pfu_aug2.0_480.1_00803.t1 | gi|548544393|ref|XP_005753885.1| | PREDICTED: zinc finger protein 879-like isoform X2 [Pundamilia nyererei] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_480.1_00803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00803.t1 atggaagtaagagctgggatagtaacaaagcagggacatagacagatggaccagactttacaaagtatcagtgaagaaaa tttacagaactcaacaatatacggtgaagatcagatagtggacatacatacagctgctgctgaacaggtgtctttaattt cttcccaggcagagggacaagacatggacatatcatcagggatagaggaggaaattacagggaaagatccaggaattcta gggacggatcaaggtgaagatgtaggggaggatccagagatttcagagggggaatcaggtggacaagaagagatggatcc aaaaatatgtgatgaaggaaaggacacaaaggaccattctgtattaggagaaaataatgaagtgattgagtgtagtatac aaaaattagagaaagcaatgacttctgatgaaggtgacatacatgtatcaggaaaannnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnngctcaagtttgcaagaaaaatagtcagatattgcaaccagagccttataccgatatgtccgacggtg atggtacttgtacaggaaaggatgccaacttaaacgatcagaagaatcccttcatgtgccatgtatgtggtaaaagtttt tctaagaaaagatatctaaattgccacgtaaagcgacacgaggaatccagtaagaagttcaagtgtcagatttgcggctg ggggttctttgaaagacacaaacttcgaattcatctagagacgcataaaccgagcgatcagcagtcgctaccgtataaat gtactttatgtgataaacagttccataacaaagcgggttggagcgaccatatggatggtcacgatggaaaacgaacatgg aaatgcgagtattgcgaagcagcgttcacttaccgtggggctttaaaaagacattacagggtgcacggcgaaaaacaatt caaatgtaagacttgtaataaagaatttgcacaccaagaaaatctaaactcccatatgagtatacataccggtgtgacat cacacgtctgtccctgcggtaaagcctataccgtaggggcatctctgaagagacatcaggagaagtgtaaagaacagggt aacactgcagtaacgcacagtacctccagtgtagacgttatctatgtgtgcggtgtgtgtaatagggcttttgagacagt gaccgaagtggaaactcatgcattaacacattgtcagacttaa |
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Protein
| Protein ID | pfu_aug2.0_480.1_00803.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00803.t1 MEVRAGIVTKQGHRQMDQTLQSISEENLQNSTIYGEDQIVDIHTAAAEQVSLISSQAEGQDMDISSGIEEEITGKDPGIL GTDQGEDVGEDPEISEGESGGQEEMDPKICDEGKDTKDHSVLGENNEVIECSIQKLEKAMTSDEGDIHVSGKXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQVCKKNSQILQPEPYTDMSDGDGTCTGKDANLNDQKNPFMCHVCGKSF SKKRYLNCHVKRHEESSKKFKCQICGWGFFERHKLRIHLETHKPSDQQSLPYKCTLCDKQFHNKAGWSDHMDGHDGKRTW KCEYCEAAFTYRGALKRHYRVHGEKQFKCKTCNKEFAHQENLNSHMSIHTGVTSHVCPCGKAYTVGASLKRHQEKCKEQG NTAVTHSTSSVDVIYVCGVCNRAFETVTEVETHALTHCQT |
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