Gene
| Gene Model ID | pfu_aug2.0_480.1_00806 |
|---|---|
| Locus | scaffold480.1 : 273988 ... 301153 : - |
| To GenomeBrowser | scaffold480.1:273988..301153 |
| Genes list of scaffold | scaffold480.1 |
| Synonym | pfu_aug1.0_5063.1_30861 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_480.1_00806.t1 | 1 | 1 | DnaJ | 14 | 79 | 1.6e-20 | 72.5 | 7.8e-24 | 3.8e-20 | 71.3 |
| pfu_aug2.0_480.1_00806.t1 | 1 | 1 | DUF3395 | 340 | 479 | 1.69978e-42 | 144.6 | 0.0 | 3.39955e-42 | 143.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_480.1_00806.t1 | gi|676465793|ref|XP_009057358.1| | hypothetical protein LOTGIDRAFT_217203 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_480.1_00806.t1 | gi|524907336|ref|XP_005108787.1| | PREDICTED: dnaJ homolog subfamily C member 11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_480.1_00806.t1 | gi|532098291|ref|XP_005334793.1| | PREDICTED: dnaJ homolog subfamily C member 11 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_480.1_00806.t1 | gi|507547143|ref|XP_004657455.1| | PREDICTED: dnaJ homolog subfamily C member 11 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_480.1_00806.t1 | gi|640795624|ref|XP_008053874.1| | PREDICTED: dnaJ homolog subfamily C member 11 isoform X2 [Tarsius syrichta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_480.1_00806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00806.t1 atggccgcgctcatggaagacgatggactggaaacagacgattattacacgctgttgaatgtatcaagaaaggcttccaa ggaggagataacttctgcatttagacgtctcagtagaatataccaccccgacaaacatcaggacccgttaaaaaagaaaa aagcggaaacgttgtttgccaaacttaaagacgcatacgaggttttaacagatgaagggaggagagagctgtatgacaag tttggtaccaaaggcttggaaatactaggacaagaggtgataacccgaacaaaatctccagcagaaataatagccgagtt agataggtatcataaagagcaggaagacagaaaattacaacagagaacaaatcctaagggtacagtgtctgtcagtatta acctctcagattattttgatgagagctatgtggacgatgactatggttcacagggatctggtgttgaaatcagtggaatg gccttgacccagtctgtagaatgtcctttgaccccgaaaaacacagtagtaatcactggttcagttcatgaacaaaatgg cacaggtcaagttttagtttaccaattagatagacatttacaaggcagactaacgtataatgtgttggtgtcggtaaaaa cagatttaatatatgaaacagagcaacacagggcagccataggtgtccaggtaggagttatgtcctctttctgccagctc agctatgagagaaagtttcaagatcacggatttaaattaagagtggttggaaaattgagtacaactggagcaatattaca gtatggatgtgaaaagaaaatatcacagttcagttggttgagtggtacgatgtctgtcggtacgtccggggtatcgttag atgttagggtatctcggggtcagcagacgtttatgttccctatcaagctatccgacgtaatagagccgagtgcggtattc tatggtacactcattccctctgtggtgtactttgctgtaaagaaactgattgtagatccctatatacggcagcaagagaa agagaaacaagacaacgtcaaagaagaacagttagagaaattaagacagaagaaacaggaagctgctgccacgattgaac tgatgaaagaaaccgtggagagaaatatagaatacgaagaaagaaggaacggtctgattatagtaaaggctgtgtatggg cagcttataacacaggatggtgtattagtagagagtcagtgtatagacgttagagtcccattacaggctttagtaaaaga ttcacaacttatactgatggactcaaaaactaagagtggcattccaggattctatgatccatgtccagacgaggaaaaaa gtctctacatacgttatacattcagaaatagaccacatcaagtgaccatcacagatagcgaaccaatcagaatacctctt caaaaacattttatgagggacgaatcagaacagagttttcatgacgttaagtaccatcctgaagtcaaagttttaatgat cttctaa |
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Protein
| Protein ID | pfu_aug2.0_480.1_00806.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_480.1_00806.t1 MAALMEDDGLETDDYYTLLNVSRKASKEEITSAFRRLSRIYHPDKHQDPLKKKKAETLFAKLKDAYEVLTDEGRRELYDK FGTKGLEILGQEVITRTKSPAEIIAELDRYHKEQEDRKLQQRTNPKGTVSVSINLSDYFDESYVDDDYGSQGSGVEISGM ALTQSVECPLTPKNTVVITGSVHEQNGTGQVLVYQLDRHLQGRLTYNVLVSVKTDLIYETEQHRAAIGVQVGVMSSFCQL SYERKFQDHGFKLRVVGKLSTTGAILQYGCEKKISQFSWLSGTMSVGTSGVSLDVRVSRGQQTFMFPIKLSDVIEPSAVF YGTLIPSVVYFAVKKLIVDPYIRQQEKEKQDNVKEEQLEKLRQKKQEAAATIELMKETVERNIEYEERRNGLIIVKAVYG QLITQDGVLVESQCIDVRVPLQALVKDSQLILMDSKTKSGIPGFYDPCPDEEKSLYIRYTFRNRPHQVTITDSEPIRIPL QKHFMRDESEQSFHDVKYHPEVKVLMIF |
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