Gene
| Gene Model ID | pfu_aug2.0_481.1_04237 |
|---|---|
| Locus | scaffold481.1 : 35423 ... 72705 : - |
| To GenomeBrowser | scaffold481.1:35423..72705 |
| Genes list of scaffold | scaffold481.1 |
| Synonym | pfu_aug1.0_105.1_29104 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ddb1- and cul4-associated factor 6- partial | GO:0005654 GO:0005737 GO:0005925 GO:0016567 GO:0030374 GO:0045944 GO:0080008 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_481.1_04237.t1 | 3 | 1 | WD40 | 30 | 48 | 8.0e-07 | 28.7 | 0.016 | 240.0 | 1.8 |
| pfu_aug2.0_481.1_04237.t1 | 3 | 2 | WD40 | 982 | 998 | 8.0e-07 | 28.7 | 0.001 | 15.0 | 5.6 |
| pfu_aug2.0_481.1_04237.t1 | 3 | 3 | WD40 | 1008 | 1039 | 8.0e-07 | 28.7 | 3.4e-07 | 0.005 | 16.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_481.1_04237.t1 | gi|89269100|emb|CAJ81508.1| | novel protein similar to IQ motif and WD repeats 1 (IQWD1) [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_481.1_04237.t1 | gi|118601170|ref|NP_001073033.1| | DDB1- and CUL4-associated factor 6 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_481.1_04237.t1 | gi|704317831|ref|XP_010168078.1| | PREDICTED: DDB1- and CUL4-associated factor 6-like, partial [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_481.1_04237.t1 | gi|328909283|gb|AEB61309.1| | DDB1- and CUL4-associated factor 6-like protein, partial [Equus caballus] | 0.0 |
| pfu_aug2.0_481.1_04237.t1 | gi|723577399|ref|XP_010308828.1| | PREDICTED: DDB1- and CUL4-associated factor 6-like, partial [Balearica regulorum gibbericeps] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_481.1_04237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04237.t1 atgttaggtaccagggccacaggtaattataccgggaagggaatcactgggatgatgtcctacttcacagctcctacatt atctaacagagcttacagaattacctctcttagttacagccctaatggagaggatcttcttgtcagttactcctcagagt acatctacttgttctctactaaggacagcaagagcaaaagcttagagaaatcatttccagaaaaacaaagggatggtgtt gactcctccacacaatcacttccaaggaaatctcagtctaaatcttcaggtagaagtgaagtatccaagacgttaaatcc aaaatcaagtgtcaaagtggcgacaaaaacaaaaggcaaatcccaaagacaagacactcaaaatgaatctcacatgaaag acattaaacagggtcaatctagggagtcggcatactcaggtagtgatcatgtgacctctacatcacatgacagtatttcc cgtgtaacagacaggatatcaccatcatcagtatataatcctgaacccggaccttcttcaagtaaaccaagaaagttgtc aatgcattcagaagaagagagggtatttcatccatcgtcctccccgaggcagtccagctctgaaggtttgacctcgctcc ttgaccctggagctttgaccgacacctccagacagccacccgtcaaacgattaaggcttagaggtgattggtcagatacc ggtcctaatgcacggcctgaaagtgaacgcaggacttctgattcagtagagggggtagaggagcaacccagatctcatac tactataatgcagagaatgtctgacatgctgactcgctggctggacggtaacctccgtagacagggaacactagacagag tactctcccctgctgatcagcttgatgaggaaggaggacaacaggtgatggaggcagaatctactacagatggaaataat gaggcaggtcctacaagggaggataactcttctcaagagagaatggatacatcagttacatctacagtgacggtggagga ttttccagagagtcattcacagacaaatttaccagagagcagtcaggctataacagctgttccacaatccacaacagtct gtactcccagccattcagcaagtcttccctcagaatctgaaatccagcctgatataatacccaatccagcatccaatact caggaaagcaacccctcagagtcccgagaggctgacagtctgccaagtcagagagatgtaatggtgattcctaatgactc ggctgctcctctggaacctgtcattagtctgcattactccacagagggcaccactagtagcacaatacgactgggatttg ctcgctttgagaatctcgaggctggattattgcagcgtagtgcagaaaatgcttcacttcacccctttgttcacagtaca gctcagcagcaaagggatataactccagctgactccacggtggacagtacaagcttggagcatgagggctcgggaattcc tggcccagaaatggaagaaaccagtaatcaccaggatagagaggaaaccagtaatcaccaggaaagagaggaaaccagta atcaccaggaaagagaggaaaccagtaatcaccaggatagagaagaaaccagtaatcaccaggaagagaagaaaccagta atcaccaggatagagaggaaaccagtaatcaccaggaaagagaggaaaccagtaatcaccaggaaagagaggaaaccagt aatcaccaggatagagaagaaatctgaaaccagtaatcaccaggatagagaagaaaccagtaatcaccaggatagagaag aaacctgtaatcaccaggatagagaagtgcttgcttgtggtcaaagtataaatgatagcttatttctaaatgaaagtcaa aacgtgaaagataaagtttgtgatacctatctagatgaaactagtacaattagttctaaccctgatcatacacctgtctt tctggcaacctgtcctgctgtcactacatcagaatctataaacacacctgaagttagaggtaatgtactttctgaagaac aacatgatgagagatacaacataaatgatgtacctgaggaatgtgcctgtagtaagagtgtagtcaaggaaggtaatcag ggattgtccacacatgatcatactgaggtaggtactagtgctatagtagaacaaactgataactcagatgataaccatag gacacctaccacccagtgtagtgatccaataccaggaactagtggtgcaagtgatgttaaaactagtgataatatagcaa gtggtaccaggaaaaagactggcatgagcaaacaattacaagagaaactaaaaaatattggtaggagaaaaacttttgaa aaacttgaaagggtttgcaaagatatgatggcaagaagtgttctacaggactcaactagagcagctgaaggtcaacagac aactgaggagagcagatctcagagagaggctcagcaaagtgaaagagaggcttcagagagcgaaagagaggctgatatgg agatggaagaaattgttagcgaaagtggaggagctgaggcagcatgcatgtcagataataccacagagagcattgataca acccctgtccgcagtagaaggattgggcggagtggccctcccacacagaccctccctgatccacaggcccaccaagacag cagtgaggatgaggataactcaggaggtacacaaagggagccacgtgacacgttagacagacatatcacagcaataaggc ttcaggagatgtacagaaagaaacaagaagagaaagagaaagaagaaatggagcttcgaaatgtctaccaaccagaacat accatcaagttcaaaggtcacagaaatgccaggacgatgataaaggaggccaatttttggggtaatgattttgtgatgag tggttctgactgtggacatatctttatctgggatcgacatacagggaggctagttaatctactggaggcagatcgtcatg ttgttaactgtctacaaccacatccttttgatccaattatggcatcaagtggtatagactacgacataaagatatgggcc ccactggctgaggagtgctgctttgatgagagtaaagctgctgagttatttttgtattcaggtcgagcctctgccagtag agagaaccaggctggacacgacagttctgattcggattga |
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Protein
| Protein ID | pfu_aug2.0_481.1_04237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04237.t1 MLGTRATGNYTGKGITGMMSYFTAPTLSNRAYRITSLSYSPNGEDLLVSYSSEYIYLFSTKDSKSKSLEKSFPEKQRDGV DSSTQSLPRKSQSKSSGRSEVSKTLNPKSSVKVATKTKGKSQRQDTQNESHMKDIKQGQSRESAYSGSDHVTSTSHDSIS RVTDRISPSSVYNPEPGPSSSKPRKLSMHSEEERVFHPSSSPRQSSSEGLTSLLDPGALTDTSRQPPVKRLRLRGDWSDT GPNARPESERRTSDSVEGVEEQPRSHTTIMQRMSDMLTRWLDGNLRRQGTLDRVLSPADQLDEEGGQQVMEAESTTDGNN EAGPTREDNSSQERMDTSVTSTVTVEDFPESHSQTNLPESSQAITAVPQSTTVCTPSHSASLPSESEIQPDIIPNPASNT QESNPSESREADSLPSQRDVMVIPNDSAAPLEPVISLHYSTEGTTSSTIRLGFARFENLEAGLLQRSAENASLHPFVHST AQQQRDITPADSTVDSTSLEHEGSGIPGPEMEETSNHQDREETSNHQEREETSNHQEREETSNHQDREETSNHQEEKKPV ITRIERKPVITRKERKPVITRKERKPVITRIEKKSETSNHQDREETSNHQDREETCNHQDREVLACGQSINDSLFLNESQ NVKDKVCDTYLDETSTISSNPDHTPVFLATCPAVTTSESINTPEVRGNVLSEEQHDERYNINDVPEECACSKSVVKEGNQ GLSTHDHTEVGTSAIVEQTDNSDDNHRTPTTQCSDPIPGTSGASDVKTSDNIASGTRKKTGMSKQLQEKLKNIGRRKTFE KLERVCKDMMARSVLQDSTRAAEGQQTTEESRSQREAQQSEREASESEREADMEMEEIVSESGGAEAACMSDNTTESIDT TPVRSRRIGRSGPPTQTLPDPQAHQDSSEDEDNSGGTQREPRDTLDRHITAIRLQEMYRKKQEEKEKEEMELRNVYQPEH TIKFKGHRNARTMIKEANFWGNDFVMSGSDCGHIFIWDRHTGRLVNLLEADRHVVNCLQPHPFDPIMASSGIDYDIKIWA PLAEECCFDESKAAELFLYSGRASASRENQAGHDSSDSD |
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