Gene
| Gene Model ID | pfu_aug2.0_481.1_04243 |
|---|---|
| Locus | scaffold481.1 : 267233 ... 293625 : - |
| To GenomeBrowser | scaffold481.1:267233..293625 |
| Genes list of scaffold | scaffold481.1 |
| Synonym | pfu_aug1.0_4156.1_01642 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| inverted formin-2 isoform x1 | GO:0009987 GO:0016043 GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_481.1_04243.t1 | 3 | 1 | FH2 | 69 | 109 | 2.8026e-45 | 154.6 | 0.72 | 3600.0 | -3.5 |
| pfu_aug2.0_481.1_04243.t1 | 3 | 1 | Drf_GBD | 139 | 230 | 1.5e-21 | 76.6 | 3.3e-14 | 1.6e-10 | 40.6 |
| pfu_aug2.0_481.1_04243.t1 | 3 | 2 | Drf_GBD | 269 | 367 | 1.5e-21 | 76.6 | 9.9e-15 | 4.9e-11 | 42.3 |
| pfu_aug2.0_481.1_04243.t1 | 1 | 1 | Drf_FH3 | 348 | 499 | 3.8e-13 | 49.2 | 3.1e-16 | 1.5e-12 | 47.3 |
| pfu_aug2.0_481.1_04243.t1 | 3 | 2 | FH2 | 477 | 528 | 2.8026e-45 | 154.6 | 0.48 | 2400.0 | -3.0 |
| pfu_aug2.0_481.1_04243.t1 | 3 | 3 | FH2 | 881 | 1096 | 2.8026e-45 | 154.6 | 0.0 | 2.8026e-45 | 154.6 |
| pfu_aug2.0_481.1_04243.t1 | 3 | 3 | Drf_GBD | 926 | 958 | 1.5e-21 | 76.6 | 1.4 | 6800.0 | -3.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_481.1_04243.t1 | gi|620950104|ref|XP_007661827.1| | PREDICTED: inverted formin-2 isoform X1 [Ornithorhynchus anatinus] | 0.0 |
| pfu_aug2.0_481.1_04243.t1 | gi|395504427|ref|XP_003756552.1| | 0.0 | |
| pfu_aug2.0_481.1_04243.t1 | gi|126290361|ref|XP_001372702.1| | PREDICTED: inverted formin-2 isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_481.1_04243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04243.t1 atgtcaaccattttgcgatttcttcgacgcactgcttcacgcttgtcattgagaaagagaaaaaggcgtcgtaaaaataa aagcagagagagcgcaggcgctgatgttgacgaggttgacgcggacgtggcgtcaaaacttttgtcagaggaaataaaac aatcaccagacggtgtcaaagttgaacaagtggaagtacacatgaggagggcatcacaggaagcggaaattatggaaaac caaaaccaaaacgggaagatagcacgatcagattcggaatcgactgcagattcggaattgaagaaatctttacaaaatgg ggacaatgacggttcgtcttccgattctggtggaaaagacaggaagtggaatcttagggataaaataaaattcagactga tgcggagagaaatcagtgacagtgatccggatgattgcgtggaggcgatgaaatttccgacagtgcataaattcgctgca ttaaaaaagaaattaaaaaccgccaacgtagaatggatacagagctttctggataacggaggtttagacgtactactgga ttgcgtcgatgaggtggggacgcggcgcgttaaccaactgtctgacgcattgctactgttggagtgcgtctcctgtatca agaagcttgtgaacaacaaatctggtctgggatacttggtgcaacatgggctgtatactcaaaagctagtgaaagatacc aaccttctgagtataatcaacgatgccttcttatccaactcctgcgtctacctcttacgtcatccctccgtcatcaattt ctgtcgtctgcgaaagaagctgaagagcgaagacaaaagatggatggaagactttctacgtcgagatggactagatttgt tgtttgagtgtttggataatttggggaaatatcacggaacattttccaacatggttttaagaatggagtgtggaatgtgt attcgaacggtgatgaattcgtcactcggtctccaatgtttgatttctacacgcgtcggaacaaaattctcttcagcatt ggacaccaacaacgtgatggtaaagaaacaggtcattgaacttctgtctgcgctatgtgtttactccaatgatggataca ggctcaccctggacgcactggaaagtttcaagcttgaggaacgagtcattatccataacaaattcaatggactgaacatc ctcgatttgataaacaatctgcgtaacgaggatgacgaggatctgattattcagtgtgacgtatttgatgacgaaaagca gtcagacgacgacgaattcgcagtacagaatccggattgtgtggacatcaacgatcatagggaagtcttcaatgtcctgt ttgaaaaggtgtacaacaccccgcaagccgacgtttttctgacagtattacagacgctcttacaaatcgatccagaggat cctatgagtgatcttcaatggagtatagtagagacggcagttcgtagagcgatgttggtggatgtttctctgataaataa aagcagcgctctacctctgtttttggactctgcaaatccactgtacatgaaaccccctgttcaatctaaggcagctcaga ccgatttcaatggtcaaagtataaaacgtgacgtaaatagaactacgaaacatagtgtatctttgactgaagaaattatc aggaaattggccctcaaatcgcagtcctcagtgcctgtagatattgatggtaccggtgatagaaaaacgagatctgatat agtagagaaaaacttaagtactcaggataggccaatattatctcaagatgataataaatcagaaagcaataaaaccccaa ataatttgtctggatctgaacagaaaaaagctgacggggacagtattaattcagttgaggctcaaattgacgagtgcttt gaatttgtaaacggtaatgctttatcggatgaggaaagtggtgattctaaacaaacaggaaacagtattgagaaggtaga agtagaaactaaaacagaccaaagtcttcccgatggtgcgcgtcagaataattctttagatctttcaccaaatgactcta caaataaaaattctgaaaccgaaaaagtgcaatcaccttcaaattcatcggaatcatctatattaacaaatggaatacct ttatcctcatctcaaaacaaggaaaatacagcggaagttttaacgaaggaagttaaattgcaatccccacatgaatctgg cgctccaccaccaccaccaccaccgccgcctccacttcctggcgtgccacaagcgccacctccgccaatgttgcctggca tgtaccaacaacctgtccctggtgcaccaccaccgccgccacttcctggcattcctggtgcgccaccacctccgccactt ccgggaattccgggcgcgccaccaccgccaccacttcctggtgttccaggcgcgccaccaccaccgccgccacctcccgc aattcccggagtaccacctccgccaccacttccaggcgcaccacttccgcctggtgcgccaccaccaccgccaccacctc caggagtcggtggtttaatacgtgccaaaccggcgccactcgtgttttctgcggccccagcaatgtcaaggtcaatgtgg acgccgacacctaaacacaagatgaagacgttcaattggaccaaagtacctccacagaccatatcgtgttcccgtgagaa tgtatggaaagacatattagaaatgcaggactcaattcatgtcaagtacgagacgattgaacagctcttctgtcagaagc agatccagaaggcgagtgctgccaacgacaacaaaaagaagaaacaaccttcagaggttttacttctagacactaagagg agcatgaatgtcaacatcttccttaaacaattcaaatgtagtcacaaagaaataattgaaatgttagaggaagggaacgt aactaagataggaccagagagactgagaggtcttcagaaaatcctaccggacagtgacgagattaatctagtcaaaagtt acacgggtgatacggacaaacttgggaacgcggagaaattctaccttgtgctctctcaaacaccagccttccaaatccga attgggggacttgtactcaaagatgacgtcagagttgctatggacacactttatcctaatattcagatttacattcaggc ctgcaatcagcttttggacaacgaatccctgaagttgtttctacgttacgttctccataccggaaattttctaaatgcgg tgagtgctttacaaatttcaggagcgttacgatggttacaatcgtcactcttcattaattttatagttaatgcatgtgtt tctaaagccatacaaggcatagtcattgatgttttaatgtag |
|
Protein
| Protein ID | pfu_aug2.0_481.1_04243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_481.1_04243.t1 MSTILRFLRRTASRLSLRKRKRRRKNKSRESAGADVDEVDADVASKLLSEEIKQSPDGVKVEQVEVHMRRASQEAEIMEN QNQNGKIARSDSESTADSELKKSLQNGDNDGSSSDSGGKDRKWNLRDKIKFRLMRREISDSDPDDCVEAMKFPTVHKFAA LKKKLKTANVEWIQSFLDNGGLDVLLDCVDEVGTRRVNQLSDALLLLECVSCIKKLVNNKSGLGYLVQHGLYTQKLVKDT NLLSIINDAFLSNSCVYLLRHPSVINFCRLRKKLKSEDKRWMEDFLRRDGLDLLFECLDNLGKYHGTFSNMVLRMECGMC IRTVMNSSLGLQCLISTRVGTKFSSALDTNNVMVKKQVIELLSALCVYSNDGYRLTLDALESFKLEERVIIHNKFNGLNI LDLINNLRNEDDEDLIIQCDVFDDEKQSDDDEFAVQNPDCVDINDHREVFNVLFEKVYNTPQADVFLTVLQTLLQIDPED PMSDLQWSIVETAVRRAMLVDVSLINKSSALPLFLDSANPLYMKPPVQSKAAQTDFNGQSIKRDVNRTTKHSVSLTEEII RKLALKSQSSVPVDIDGTGDRKTRSDIVEKNLSTQDRPILSQDDNKSESNKTPNNLSGSEQKKADGDSINSVEAQIDECF EFVNGNALSDEESGDSKQTGNSIEKVEVETKTDQSLPDGARQNNSLDLSPNDSTNKNSETEKVQSPSNSSESSILTNGIP LSSSQNKENTAEVLTKEVKLQSPHESGAPPPPPPPPPPLPGVPQAPPPPMLPGMYQQPVPGAPPPPPLPGIPGAPPPPPL PGIPGAPPPPPLPGVPGAPPPPPPPPAIPGVPPPPPLPGAPLPPGAPPPPPPPPGVGGLIRAKPAPLVFSAAPAMSRSMW TPTPKHKMKTFNWTKVPPQTISCSRENVWKDILEMQDSIHVKYETIEQLFCQKQIQKASAANDNKKKKQPSEVLLLDTKR SMNVNIFLKQFKCSHKEIIEMLEEGNVTKIGPERLRGLQKILPDSDEINLVKSYTGDTDKLGNAEKFYLVLSQTPAFQIR IGGLVLKDDVRVAMDTLYPNIQIYIQACNQLLDNESLKLFLRYVLHTGNFLNAVSALQISGALRWLQSSLFINFIVNACV SKAIQGIVIDVLM |
|