Gene
| Gene Model ID | pfu_aug2.0_4815.1_19364 |
|---|---|
| Locus | scaffold4815.1 : 7857 ... 18135 : - |
| To GenomeBrowser | scaffold4815.1:7857..18135 |
| Genes list of scaffold | scaffold4815.1 |
| Synonym | pfu_aug1.0_7239.1_31356 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| conserved oligomeric golgi complex subunit 8 | GO:0006810 GO:0016020 GO:0017119 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4815.1_19364.t1 | 2 | 1 | Dor1 | 3 | 139 | 0.0 | 156.2 | 0.0 | 0.0 | 156.2 |
| pfu_aug2.0_4815.1_19364.t1 | 2 | 2 | Dor1 | 193 | 249 | 0.0 | 156.2 | 0.071 | 530.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_4815.1_19364.t1 | gi|676425477|ref|XP_009044344.1| | hypothetical protein LOTGIDRAFT_211655 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_4815.1_19364.t1 | gi|632944422|ref|XP_007887499.1| | PREDICTED: conserved oligomeric Golgi complex subunit 8 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_4815.1_19364.t1 | gi|524952789|ref|XP_005076389.1| | PREDICTED: conserved oligomeric Golgi complex subunit 8, partial [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_4815.1_19364.t1 | gi|119603675|gb|EAW83269.1| | hCG2027080, isoform CRA_c [Homo sapiens] | 0.0 |
| pfu_aug2.0_4815.1_19364.t1 | gi|426382680|ref|XP_004057931.1| | PREDICTED: conserved oligomeric Golgi complex subunit 8 [Gorilla gorilla gorilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_4815.1_19364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4815.1_19364.t1 atgactatagtcggagaagtcagaaactcagctcagttaatgttgaatcagctgatacaacaattacgtggtaatgtaca actcccggcatgtttacgtgtcattgggtatctcagacgaatggacgtgttcaccgaagtggaactacgtattaaattcc ttcaggcaagagacacgtggttccagtcaatattggatgctataccaacagatgattactatgtccatataacaaagaca atagaagcaagcagagtccacttatttgatataataacacagtacagggccattttctctgatgacgatccactaattag taccagcaaagatgacagcgtcaatgaatcggcattgttccacggctgggttactcataaggttgtaaacgaaacaaata tttggaaaaaatctttagaaataataaatggctattttcaatcatacagggctgaggaaactaccttcaacaaaggagag caggagaaattttctaagttttgtgacgtttacagtcagacgttattaccgtacctaaacaaatgtctacaggctttgtt tcctcctcaacagctggcacaaatcaccggcttgacagttaatgagctcacaaaatcgggaaatgaagttaccatagata tacaggaagttctaaaacctatagagcacttgcttcctcaaagggaagataccacaattcaaattcaaactgaccaatca gcaagtgtgttacaaactgctgaccaatcagcttctctgacacttccaactggatctgatgaaagtgctataaaccaatc agagtcttttagtcccgaaaaagatggccaaaactctgatgctgttaaaactggaagtgaaagtaacattgagccaacag ctgacgaagggaaagtaaaatttatgactggaaatgaacttgaagaagataatggtgtttcgtga |
|
Protein
| Protein ID | pfu_aug2.0_4815.1_19364.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4815.1_19364.t1 MTIVGEVRNSAQLMLNQLIQQLRGNVQLPACLRVIGYLRRMDVFTEVELRIKFLQARDTWFQSILDAIPTDDYYVHITKT IEASRVHLFDIITQYRAIFSDDDPLISTSKDDSVNESALFHGWVTHKVVNETNIWKKSLEIINGYFQSYRAEETTFNKGE QEKFSKFCDVYSQTLLPYLNKCLQALFPPQQLAQITGLTVNELTKSGNEVTIDIQEVLKPIEHLLPQREDTTIQIQTDQS ASVLQTADQSASLTLPTGSDESAINQSESFSPEKDGQNSDAVKTGSESNIEPTADEGKVKFMTGNELEEDNGVS |
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