Gene
| Gene Model ID | pfu_aug2.0_4823.1_12712 |
|---|---|
| Locus | scaffold4823.1 : 13715 ... 18585 : - |
| To GenomeBrowser | scaffold4823.1:13715..18585 |
| Genes list of scaffold | scaffold4823.1 |
| Synonym | pfu_aug1.0_1276.1_36915 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4823.1_12712.t2 | 2 | 1 | DNA_pol_B_2 | 146 | 338 | 3.0e-32 | 111.9 | 2.3e-21 | 3.4e-17 | 62.2 |
| pfu_aug2.0_4823.1_12712.t2 | 2 | 2 | DNA_pol_B_2 | 520 | 785 | 3.0e-32 | 111.9 | 7.9e-19 | 1.2e-14 | 53.9 |
Transcript
| Transcript ID | pfu_aug2.0_4823.1_12712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4823.1_12712.t1 atggatcctgacaaaactgactactgtcaggttttcacagctctagtgaattcgtttgacgattacacacaacttaaaca ttttgcgtttcagtatggtttaagcgatgatccacaagttctgaatagattgcaatttttgttggatagaaatgtatcat taatggccaccgagatcgacgagttccaagaaatgtgtaacttttcctactgtaacaatcaggatgcgggtccctcaaaa aaatgtagtaagcttgaattatcaccaacaagtttaaaaacaaaacagactggaggtagtgctgatgaaaaaccttatta cattgaacaaagtagtaaaagaactttcaagtcaacgttagcaacagacacttctttcaaagtaaagtttaatgaacgat ggcaagggaaaaagttaaacgatatcctaagtggacttcatgaaatgtttgatgatattatttctaaagctagaggacac gaagccgaccttggacgtgtggtaatccaacatccggatttatctaatccagttgtagtacctttacaaccatgggaaaa gcttgattcagacactgtgatggatgaaatatctaaagttctgaattcagaggaaaatctccatattgatgagaatatgg ttgtgacagttggttccataagtttacctaaaggtggtgccaaacaatcaataacccagttattcggtcacggaaattct atacagaaaaaacgttctctattctatgtagaaaacgataacaatatatgtctagcaatagctgtagggctatgctattt gaagatttgtgagagggtgagcattgatcaatttgataatctcgctgaaaacgacaatgaatctagatttgataagattt tgaaacataaaaaaatttcaaaatgcttttatgacaaacttatggataggaaacgtccaaagttacgttcagagttaggt ctacgtctatgtcaacttgcggaattaccaacaacaaggtatttaggtttaagtgatattccagcctttgagcaactctt aaacctaaacatcttcgttgtgtcttcaaaagttggtgacaaatttgtacgcatttttgagaatgacgataggcccaatc tgtttttgtatcacattgaaaatgaaacagagaaacactggcatgggatagcgaatattcaaggattttttaaaggaaaa catttttgtaaaagttgcaaccaaccttttaactcaaagcataaacattcttgtgagacatcgtgtactgtatgtcttga ttctgaatgtcgtgtgcagaaagatgcgtctatgtgtagcagttgtgggcgtctttgtcgttcaatggcatgctataacc gacacaaaagacaaagaacaaaaggtaaaattacatatccctcacaatgtgaactgtattatcagtgcgagagttgtaaa aaaatcattaaaaggggggaaagaaatcccgaggatcatgagtgtggagaatggaagtgtccttcctgtcagatgtatta cgtaggacaacatttttgtttccaaaggagtcaacccatgcccgatcctgaaaagtccaggaagaaatttattttctatg actttgaaacacgacaagatgcacaaatgacttgtgacgagggttattctccctctaaaatccgatgtcgaaaatgtgtg ggcaattctgccccatgtaaatcatgtaaactttgtcgtaattgcagagaaaacacttgtggattagcacaacaccgtgt taattttgccgtaatgcaaacctcttgtgatctgtgtcaaaatgaagaactgacaccaaactccaaatgttctaattgtg gaagaagatgtggcttttgtggtgttaaagataagaaaacaaaagaatttcaacgtgacccgtgttcggggacctgtgga catagagagacagtgtttcaaggcgaggatgcaatctttaaattttgcaattatatcacacaggaacacattgcaaatta tgttcttattgcccacaatgcaaaaagttttgatttataccccattttggaaaccctcattgagcgacatgcgatcaaac ccaataagatcatttacaatgggagcaaaattatgtacatgcatattgcaaataagttgaacttgacattcgtcgactct ttaaatttcatcccaatgccactcgctaaattgccagacgcatttgagttagaagaattatgtaaagggtttttccctca caaatttaatactttgttgaatcagaattatatcggaaaatacccccatccggatgattacggttacaacactatgtcca gtgaaaggagaaaggaattccttagatggtacaacgaaaaagaaaatgaaacgtttgactttcaatctgaaatgttaaaa tattgccgttccgatgtagatatcttgagacgggggtgcttaaagttccgtgctttattaaaagaagtcactgttggaat tgatccttttgattatgtaactatagctagcgtttgcatgggtatattcaaaactcttttcttaaaagaggaacgagaaa gagaaattacagatatagtcaacgacaaatctaagtgggtggcacaaaaaatggaaaatgaccaggaatatttacttttt aatgacacgtggatatcagttgggaaattactacaagacatgaattataggataggcaatacaagattccgaaaaagttc tatcgcagcagtgccatcccaaagctatgtaagcagagataattatagtaaactttctatacaatggcttgaatgggaaa tggaaaagaagagaaacgagggacgtcaattgaaaatacaacatgcccttcgtggaggagaatacaaagttcccggtacc aattataggtgcgatggcttcgacgcattgaccaacacaatttatgaattttatgggtgtgcttttcatggctgtccgac gtgttttccgaacaacagaattgaaatacatcatcctaccacgaaacaatctctggaggaattgtatattataaccatga aaagagaggcggagttgcgttctaggggtttcaaattaataacaaaatgggaacacaaattccaagcagatatcaagaga cattctgatttacaccaatatatcgaacatttggacatacaggatcgtctgaagcctcgagacagcttttttggtggacg cacaaacgctacaaagctttatcacaaagcccaagatggtgagagtattcaatatttcgacttcaccagtctatatcctt acacaaataaatacatgaggtaccctataggacatcctaaaatcattgtagataattttacagatatcacagactacttt ggaattgccaaagtaaagattttaccaccaagaggactttatcatcctgtgcttccctacacttcgaatgggaagcttaa atttcctttatgtcgaacttgcgccgacgaggaaaatcaaacagaatgtaaatgttcaattgaagatcgatgtgttgtag gcacatggtgtactcctgaaattcaactagctgtgaaaaagggatatacaattttgaaaatatatgaaatatatcacttc gaagaatcaacccagtatgatccaaccacaagtgaaaagggtcttttcagcgattatgtcaatatgtttttgaaaattaa acaagaagcatcgggtttcccagatgaatgtgatacagaggaacaaaaacgagagtacataagacagtataaaatcaaag aagggatcgaacttgagtataacaaaattaaagtcaacaagggtctgcggagcctggcaaaactctgtctaaatagtttc tggggaaaatacggtcaaaggttatcagtcaagcaatctcgattccttcatgaatcggaagttgaaaatatgttcaaact attgaccgatccgaggaaagatgttcacaattttcatatcataacgaaggatatgatacagttagaatggtctgatgatc ctgtgtttctgccttttgacactaaaacgaatatattcttagcctccttcacaactatgtgggccagactccgtctgtat gaggttttagacattctagacagagatgtgttgtactttgacacagatagcgttatttttcgttgtaccggcaaaagtac tttgcaaaaattaccaataggaaattatttaggagaactcacaaatgaaattaaacccaaagatggtcatataattgaat ttgtgtcaggaggacctaaaaactatgcatacaaaacaaaatctgggaaagaacattgcaaaatacgaggtttcacaatg aactgggaaaattcaaaattgataaattttgaagctgtgaaaaccatggtatgcactagagatttaaaaacaatagaaac aacaaaccagtgtaagatttcgcgtcatgccttgaaaaggaagctttacaatcgtgttgaacacaaaaaatacaaaattg tttacacaaagagacgtttattagacgatcttgacacagtgccttacggtttctga |
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| Transcript ID | pfu_aug2.0_4823.1_12712.t2 |
| Definition | - |
>pfu_aug2.0_4823.1_12712.t2 atgcccgatcctgaaaagtccaggaagaaatttattttctatgactttgaaacacgacaagatgcacaaatgacttgtga cgagggttattctccctctaaaatccgatgtcgaaaatgtgtgggcaattctgccccatgtaaatcatgtaaactttgtc gtaattgcagagaaaacacttgtggattagcacaacaccgtgttaattttgccgtaatgcaaacctcttgtgatctgtgt caaaatgaagaactgacaccaaactccaaatgttctaattgtggaagaagatgtggcttttgtggtgttaaagataagaa aacaaaagaatttcaacgtgacccgtgttcggggacctgtggacatagagagacagtgtttcaaggcgaggatgcaatct ttaaattttgcaattatatcacacaggaacacattgcaaattatgttcttattgcccacaatgcaaaaagttttgattta taccccattttggaaaccctcattgagcgacatgcgatcaaacccaataagatcatttacaatgggagcaaaattatgta catgcatattgcaaataagttgaacttgacattcgtcgactctttaaatttcatcccaatgccactcgctaaattgccag acgcatttgagttagaagaattatgtaaagggtttttccctcacaaatttaatactttgttgaatcagaattatatcgga aaatacccccatccggatgattacggttacaacactatgtccagtgaaaggagaaaggaattccttagatggtacaacga aaaagaaaatgaaacgtttgactttcaatctgaaatgttaaaatattgccgttccgatgtagatatcttgagacgggggt gcttaaagttccgtgctttattaaaagaagtcactgttggaattgatccttttgattatgtaactatagctagcgtttgc atgggtatattcaaaactcttttcttaaaagaggaacgagaaagagaaattacagatatagtcaacgacaaatctaagtg ggtggcacaaaaaatggaaaatgaccaggaatatttactttttaatgacacgtggatatcagttgggaaattactacaag acatgaattataggataggcaatacaagattccgaaaaagttctatcgcagcagtgccatcccaaagctatgtaagcaga gataattatagtaaactttctatacaatggcttgaatgggaaatggaaaagaagagaaacgagggacgtcaattgaaaat acaacatgcccttcgtggaggagaatacaaagttcccggtaccaattataggtgcgatggcttcgacgcattgaccaaca caatttatgaattttatgggtgtgcttttcatggctgtccgacgtgttttccgaacaacagaattgaaatacatcatcct accacgaaacaatctctggaggaattgtatattataaccatgaaaagagaggcggagttgcgttctaggggtttcaaatt aataacaaaatgggaacacaaattccaagcagatatcaagagacattctgatttacaccaatatatcgaacatttggaca tacaggatcgtctgaagcctcgagacagcttttttggtggacgcacaaacgctacaaagctttatcacaaagcccaagat ggtgagagtattcaatatttcgacttcaccagtctatatccttacacaaataaatacatgaggtaccctataggacatcc taaaatcattgtagataattttacagatatcacagactactttggaattgccaaagtaaagattttaccaccaagaggac tttatcatcctgtgcttccctacacttcgaatgggaagcttaaatttcctttatgtcgaacttgcgccgacgaggaaaat caaacagaatgtaaatgttcaattgaagatcgatgtgttgtaggcacatggtgtactcctgaaattcaactagctgtgaa aaagggatatacaattttgaaaatatatgaaatatatcacttcgaagaatcaacccagtatgatccaaccacaagtgaaa agggtcttttcagcgattatgtcaatatgtttttgaaaattaaacaagaagcatcgggtttcccagatgaatgtgataca gaggaacaaaaacgagagtacataagacagtataaaatcaaagaagggatcgaacttgagtataacaaaattaaagtcaa caagggtctgcggagcctggcaaaactctgtctaaatagtttctggggaaaatacggtcaaaggttatcagtcaagcaat ctcgattccttcatgaatcggaagttgaaaatatgttcaaactattgaccgatccgaggaaagatgttcacaattttcat atcataacgaaggatatgatacagttagaatggtctgatgatcctgtgtttctgccttttgacactaaaacgaatatatt cttagcctccttcacaactatgtgggccagactccgtctgtatgaggttttagacattctagacagagatgtgttgtact ttgacacagatagcgttatttttcgttgtaccggcaaaagtactttgcaaaaattaccaataggaaattatttaggagaa ctcacaaatgaaattaaacccaaagatggtcatataattgaatttgtgtcaggaggacctaaaaactatgcatacaaaac aaaatctgggaaagaacattgcaaaatacgaggtttcacaatgaactgggaaaattcaaaattgataaattttgaagctg tgaaaaccatggtatgcactagagatttaaaaacaatagaaacaacaaaccagtgtaagatttcgcgtcatgccttgaaa aggaagctttacaatcgtgttgaacacaaaaaatacaaaattgtttacacaaagagacgtttattagacgatcttgacac agtgccttacggtttctga |
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Protein
| Protein ID | pfu_aug2.0_4823.1_12712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4823.1_12712.t1 MDPDKTDYCQVFTALVNSFDDYTQLKHFAFQYGLSDDPQVLNRLQFLLDRNVSLMATEIDEFQEMCNFSYCNNQDAGPSK KCSKLELSPTSLKTKQTGGSADEKPYYIEQSSKRTFKSTLATDTSFKVKFNERWQGKKLNDILSGLHEMFDDIISKARGH EADLGRVVIQHPDLSNPVVVPLQPWEKLDSDTVMDEISKVLNSEENLHIDENMVVTVGSISLPKGGAKQSITQLFGHGNS IQKKRSLFYVENDNNICLAIAVGLCYLKICERVSIDQFDNLAENDNESRFDKILKHKKISKCFYDKLMDRKRPKLRSELG LRLCQLAELPTTRYLGLSDIPAFEQLLNLNIFVVSSKVGDKFVRIFENDDRPNLFLYHIENETEKHWHGIANIQGFFKGK HFCKSCNQPFNSKHKHSCETSCTVCLDSECRVQKDASMCSSCGRLCRSMACYNRHKRQRTKGKITYPSQCELYYQCESCK KIIKRGERNPEDHECGEWKCPSCQMYYVGQHFCFQRSQPMPDPEKSRKKFIFYDFETRQDAQMTCDEGYSPSKIRCRKCV GNSAPCKSCKLCRNCRENTCGLAQHRVNFAVMQTSCDLCQNEELTPNSKCSNCGRRCGFCGVKDKKTKEFQRDPCSGTCG HRETVFQGEDAIFKFCNYITQEHIANYVLIAHNAKSFDLYPILETLIERHAIKPNKIIYNGSKIMYMHIANKLNLTFVDS LNFIPMPLAKLPDAFELEELCKGFFPHKFNTLLNQNYIGKYPHPDDYGYNTMSSERRKEFLRWYNEKENETFDFQSEMLK YCRSDVDILRRGCLKFRALLKEVTVGIDPFDYVTIASVCMGIFKTLFLKEEREREITDIVNDKSKWVAQKMENDQEYLLF NDTWISVGKLLQDMNYRIGNTRFRKSSIAAVPSQSYVSRDNYSKLSIQWLEWEMEKKRNEGRQLKIQHALRGGEYKVPGT NYRCDGFDALTNTIYEFYGCAFHGCPTCFPNNRIEIHHPTTKQSLEELYIITMKREAELRSRGFKLITKWEHKFQADIKR HSDLHQYIEHLDIQDRLKPRDSFFGGRTNATKLYHKAQDGESIQYFDFTSLYPYTNKYMRYPIGHPKIIVDNFTDITDYF GIAKVKILPPRGLYHPVLPYTSNGKLKFPLCRTCADEENQTECKCSIEDRCVVGTWCTPEIQLAVKKGYTILKIYEIYHF EESTQYDPTTSEKGLFSDYVNMFLKIKQEASGFPDECDTEEQKREYIRQYKIKEGIELEYNKIKVNKGLRSLAKLCLNSF WGKYGQRLSVKQSRFLHESEVENMFKLLTDPRKDVHNFHIITKDMIQLEWSDDPVFLPFDTKTNIFLASFTTMWARLRLY EVLDILDRDVLYFDTDSVIFRCTGKSTLQKLPIGNYLGELTNEIKPKDGHIIEFVSGGPKNYAYKTKSGKEHCKIRGFTM NWENSKLINFEAVKTMVCTRDLKTIETTNQCKISRHALKRKLYNRVEHKKYKIVYTKRRLLDDLDTVPYGF |
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| Protein ID | pfu_aug2.0_4823.1_12712.t2 |
| Definition | - |
>pfu_aug2.0_4823.1_12712.t2 MPDPEKSRKKFIFYDFETRQDAQMTCDEGYSPSKIRCRKCVGNSAPCKSCKLCRNCRENTCGLAQHRVNFAVMQTSCDLC QNEELTPNSKCSNCGRRCGFCGVKDKKTKEFQRDPCSGTCGHRETVFQGEDAIFKFCNYITQEHIANYVLIAHNAKSFDL YPILETLIERHAIKPNKIIYNGSKIMYMHIANKLNLTFVDSLNFIPMPLAKLPDAFELEELCKGFFPHKFNTLLNQNYIG KYPHPDDYGYNTMSSERRKEFLRWYNEKENETFDFQSEMLKYCRSDVDILRRGCLKFRALLKEVTVGIDPFDYVTIASVC MGIFKTLFLKEEREREITDIVNDKSKWVAQKMENDQEYLLFNDTWISVGKLLQDMNYRIGNTRFRKSSIAAVPSQSYVSR DNYSKLSIQWLEWEMEKKRNEGRQLKIQHALRGGEYKVPGTNYRCDGFDALTNTIYEFYGCAFHGCPTCFPNNRIEIHHP TTKQSLEELYIITMKREAELRSRGFKLITKWEHKFQADIKRHSDLHQYIEHLDIQDRLKPRDSFFGGRTNATKLYHKAQD GESIQYFDFTSLYPYTNKYMRYPIGHPKIIVDNFTDITDYFGIAKVKILPPRGLYHPVLPYTSNGKLKFPLCRTCADEEN QTECKCSIEDRCVVGTWCTPEIQLAVKKGYTILKIYEIYHFEESTQYDPTTSEKGLFSDYVNMFLKIKQEASGFPDECDT EEQKREYIRQYKIKEGIELEYNKIKVNKGLRSLAKLCLNSFWGKYGQRLSVKQSRFLHESEVENMFKLLTDPRKDVHNFH IITKDMIQLEWSDDPVFLPFDTKTNIFLASFTTMWARLRLYEVLDILDRDVLYFDTDSVIFRCTGKSTLQKLPIGNYLGE LTNEIKPKDGHIIEFVSGGPKNYAYKTKSGKEHCKIRGFTMNWENSKLINFEAVKTMVCTRDLKTIETTNQCKISRHALK RKLYNRVEHKKYKIVYTKRRLLDDLDTVPYGF |
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