Gene
| Gene Model ID | pfu_aug2.0_484.1_14204 |
|---|---|
| Locus | scaffold484.1 : 23608 ... 31465 : - |
| To GenomeBrowser | scaffold484.1:23608..31465 |
| Genes list of scaffold | scaffold484.1 |
| Synonym | pfu_aug1.0_2607.1_30179 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_484.1_14204.t1 | 6 | 1 | LRR_8 | 174 | 209 | 6.7e-27 | 93.0 | 2.2e-07 | 0.00055 | 19.6 |
| pfu_aug2.0_484.1_14204.t1 | 6 | 2 | LRR_8 | 174 | 232 | 6.7e-27 | 93.0 | 2.7e-10 | 6.6e-07 | 28.9 |
| pfu_aug2.0_484.1_14204.t1 | 5 | 1 | LRR_4 | 174 | 213 | 1.3e-26 | 91.7 | 1.6e-11 | 4.1e-08 | 32.6 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 1 | LRR_7 | 174 | 190 | 4.6e-12 | 44.0 | 0.0071 | 18.0 | 6.1 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 1 | LRR_1 | 175 | 196 | 3.2e-19 | 65.9 | 0.00016 | 0.38 | 10.9 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 2 | LRR_7 | 198 | 213 | 4.6e-12 | 44.0 | 0.0097 | 24.0 | 5.7 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 2 | LRR_1 | 199 | 218 | 3.2e-19 | 65.9 | 9.0e-05 | 0.22 | 11.6 |
| pfu_aug2.0_484.1_14204.t1 | 6 | 3 | LRR_8 | 221 | 278 | 6.7e-27 | 93.0 | 1.4e-12 | 3.3e-09 | 36.3 |
| pfu_aug2.0_484.1_14204.t1 | 5 | 2 | LRR_4 | 221 | 260 | 1.3e-26 | 91.7 | 3.8e-11 | 9.3e-08 | 31.5 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 3 | LRR_1 | 221 | 240 | 3.2e-19 | 65.9 | 0.00014 | 0.34 | 11.1 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 3 | LRR_7 | 221 | 236 | 4.6e-12 | 44.0 | 7.2e-05 | 0.18 | 12.1 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 4 | LRR_7 | 243 | 259 | 4.6e-12 | 44.0 | 0.00096 | 2.4 | 8.7 |
| pfu_aug2.0_484.1_14204.t1 | 5 | 3 | LRR_4 | 244 | 278 | 1.3e-26 | 91.7 | 4.2e-08 | 0.0001 | 21.8 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 4 | LRR_1 | 244 | 263 | 3.2e-19 | 65.9 | 4.8e-05 | 0.12 | 12.5 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 5 | LRR_7 | 266 | 286 | 4.6e-12 | 44.0 | 0.19 | 470.0 | 1.8 |
| pfu_aug2.0_484.1_14204.t1 | 5 | 4 | LRR_4 | 276 | 312 | 1.3e-26 | 91.7 | 2.8e-08 | 7.0e-05 | 22.3 |
| pfu_aug2.0_484.1_14204.t1 | 6 | 4 | LRR_8 | 277 | 331 | 6.7e-27 | 93.0 | 3.8e-11 | 9.5e-08 | 31.6 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 5 | LRR_1 | 277 | 295 | 3.2e-19 | 65.9 | 0.024 | 59.0 | 4.2 |
| pfu_aug2.0_484.1_14204.t1 | 6 | 5 | LRR_8 | 297 | 352 | 6.7e-27 | 93.0 | 3.9e-11 | 9.6e-08 | 31.6 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 6 | LRR_1 | 297 | 318 | 3.2e-19 | 65.9 | 5.0e-07 | 0.0012 | 18.5 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 6 | LRR_7 | 297 | 312 | 4.6e-12 | 44.0 | 0.00021 | 0.53 | 10.7 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 7 | LRR_7 | 319 | 335 | 4.6e-12 | 44.0 | 2.8e-05 | 0.069 | 13.3 |
| pfu_aug2.0_484.1_14204.t1 | 5 | 5 | LRR_4 | 320 | 358 | 1.3e-26 | 91.7 | 6.9e-07 | 0.0017 | 17.9 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 7 | LRR_1 | 320 | 341 | 3.2e-19 | 65.9 | 4.9e-05 | 0.12 | 12.4 |
| pfu_aug2.0_484.1_14204.t1 | 6 | 6 | LRR_8 | 343 | 375 | 6.7e-27 | 93.0 | 0.13 | 320.0 | 1.1 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 8 | LRR_7 | 343 | 358 | 4.6e-12 | 44.0 | 0.04 | 99.0 | 3.8 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 8 | LRR_1 | 344 | 360 | 3.2e-19 | 65.9 | 0.052 | 130.0 | 3.2 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 9 | LRR_1 | 370 | 389 | 3.2e-19 | 65.9 | 0.064 | 160.0 | 2.9 |
| pfu_aug2.0_484.1_14204.t1 | 9 | 9 | LRR_7 | 370 | 375 | 4.6e-12 | 44.0 | 1.3 | 3300.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_484.1_14204.t1 | gi|260831320|ref|XP_002610607.1| | hypothetical protein BRAFLDRAFT_65797 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_484.1_14204.t1 | gi|676458624|ref|XP_009055036.1| | hypothetical protein LOTGIDRAFT_232448 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_484.1_14204.t1 | gi|585657173|ref|XP_006815797.1| | PREDICTED: leucine-rich repeat-containing protein 69-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_484.1_14204.t1 | gi|390370821|ref|XP_001195669.2| | PREDICTED: leucine-rich repeat-containing protein 58 [Strongylocentrotus purpuratus] | 2.0e-39 |
| pfu_aug2.0_484.1_14204.t1 | gi|72080205|ref|XP_792673.1| | PREDICTED: leucine-rich repeat-containing protein 58 [Strongylocentrotus purpuratus] | 2.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_484.1_14204.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14204.t1 atgggtaacatattatacagctacctaacatatatggtgagggacgtgattttcttcagtagcgatgtacagacgacagc catagcggtggccattgccagttccctctgtctgtccattatatgggctgtctgtcacgtctttgtagagaaacacttgc cccagacaaaccgtaccaagaaaagctcaaaattctcttcacagaatggcagtaaaggtggagcaagacggcattctaga aactctagtagttcagaggaagatgtcagtttatttgatgaacctgtgaatcatagagtagatgtcccttgtgtcaggtg caaggagaactttgctgaccacacgtgtagatttgtgacatgccggttgtgttgtttctgccctgacaaatgttacgccc attctcgtgtagtgaagccggcaccatgccgaccctgcccccaaaggtcacatggtgtcacagaaatagatctcaggggg aggatggaccaatgtcctcgtcgtattggttttatgggaccacagcttacacttctaaatttagctcagaacaatctcag tgatttacccccagaaataggctgccttagaggcctgcaagaacttcatctacagaaaaatcaactctctaccattcctg atagtataggaactctagtcaacctaaaggtgcttactgtgtcccataactctctacaaacattaccagaatcagtgacc tcgttgtcaaatgtgagacatttagatgtaggtcataacaaattgtcttcactgccgaacagtcttaccagaatgcataa actaaggactctcatactcaggtacacaaagctgattatgaataacaataaccttgaggttgtaccagctgatatagaga gactgtaccagctagaaacactagatctcagtcactgtgggttacagtacattcctgaaaatctctgtcattgctcacga ctcaaacaactcaacatatcatcaaatagattgacagagctgccagtcaaactaggctccctaagacatctgtacaagtt atcagccgctaacaactgtctacagtatctacccagtactctggatcttaacaaattcaatagatgtaatctttcaggta atcctttcctccaaaaatcttgtgaacctacagagttacccaactttcctcctttaatggaattaacattacgattcata tcatcccagaagtcgctgaaagattctgtacatctactcccaaaacccttacaagaccagctaagaaatccgaagcgttg tgtattttgccatgtgccagttttccatttctacaaagaagtcacagaattccgaacctatcagcataatctccttccat tccttaccgtagactgctcaccacatctcactcaacactctcagaaaaactcacctgattga |
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Protein
| Protein ID | pfu_aug2.0_484.1_14204.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14204.t1 MGNILYSYLTYMVRDVIFFSSDVQTTAIAVAIASSLCLSIIWAVCHVFVEKHLPQTNRTKKSSKFSSQNGSKGGARRHSR NSSSSEEDVSLFDEPVNHRVDVPCVRCKENFADHTCRFVTCRLCCFCPDKCYAHSRVVKPAPCRPCPQRSHGVTEIDLRG RMDQCPRRIGFMGPQLTLLNLAQNNLSDLPPEIGCLRGLQELHLQKNQLSTIPDSIGTLVNLKVLTVSHNSLQTLPESVT SLSNVRHLDVGHNKLSSLPNSLTRMHKLRTLILRYTKLIMNNNNLEVVPADIERLYQLETLDLSHCGLQYIPENLCHCSR LKQLNISSNRLTELPVKLGSLRHLYKLSAANNCLQYLPSTLDLNKFNRCNLSGNPFLQKSCEPTELPNFPPLMELTLRFI SSQKSLKDSVHLLPKPLQDQLRNPKRCVFCHVPVFHFYKEVTEFRTYQHNLLPFLTVDCSPHLTQHSQKNSPD |
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