Gene
| Gene Model ID | pfu_aug2.0_484.1_14212 |
|---|---|
| Locus | scaffold484.1 : 200364 ... 213796 : + |
| To GenomeBrowser | scaffold484.1:200364..213796 |
| Genes list of scaffold | scaffold484.1 |
| Synonym | pfu_aug1.0_11433.1_53697 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase mitochondrial | GO:0004149 GO:0005634 GO:0005739 GO:0006099 GO:0016020 GO:0033512 GO:0045252 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_484.1_14212.t1 | 1 | 1 | 2-oxoacid_dh | 235 | 463 | 0.0 | 272.1 | 0.0 | 0.0 | 271.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_484.1_14212.t1 | gi|556947093|ref|XP_005986639.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_484.1_14212.t1 | gi|507619910|ref|XP_004625023.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [Octodon degus] | 0.0 |
| pfu_aug2.0_484.1_14212.t1 | gi|348573378|ref|XP_003472468.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [Cavia porcellus] | 0.0 |
| pfu_aug2.0_484.1_14212.t1 | gi|585188698|ref|XP_006745712.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like [Leptonychotes weddellii] | 0.0 |
| pfu_aug2.0_484.1_14212.t1 | gi|472359602|ref|XP_004399416.1| | PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial [Odobenus rosmarus divergens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_484.1_14212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14212.t1 atgaatgattatgactttcaacactcatatgaccgcaccgggattggaacccctgtcgtctgtaataataagctaggtaa agatgcaagagttttaggttctccatgctgtaagtcttcaaaccacaccaacagactaattcatggcagctgttatcagt ccactgtaagatgcttccacacctcatctccatcattattagaaaccccaggaccatgtcgtctcacaacagcaaatctg ataccaaaaaattacaaaagggagttcctccagttctttgtagaggatagatacgttcttcaaattaaaattttggatag tgactataaaagaattaacagaaagaagttcatgttcggtaaacagaatggagatgatgaagtaaagaccatgaacacac ctacatttgcagaatctatcactgaaggagatatcaggtggcaaaaaggtgatgcacctccaccaaaaacagaagcagcc ccaaagaaggaagctgctgccccaccccctgaagaaaagccaacacccccaccagctgatacaaagcctgcacccccatc atctacagcaggccccatccccacccaacctcctccttccactcctgtccccaaggcccccatgtcatccactcctgtgt cctctttgaaacctacaccagcccctgcatcagctcctgattcagctgtcaaaggtagcagaggagaaaccaggacaaag atgaacagaatgcgtaaaaggatagcccagaggttaaaggatgcccaaaattcatgtgctatgttgacaactttcaatga agttgacatgagtaacttaatggagatgaggaaactctacaaagatgcctttatgaagaagcataatctgaagctaggat ttatgtcggcttttgttaaagcatcagcgtatgccttagaagatcaacctattgtgaacgcctacatagacgattctgaa atagtgtatcgggactataaagacatctcagtcgctgtagcaacacctaagggacttgttgtacctgtgataaggaatgc agagacgatgaattatgccgatatagaaagaacaatcgcagaactcggggaaaaggctaggaacaatgcattagcaatag aggatatggaaggagggacatttacaataagtaacgggggtgtattcggctccatgatgggaacccccattattaaccct cctcagtcagcgatccttggtatgcacgccatcaaagacagggctgtagttatcaatggcaaggtggaggttcggcctat gatgtatgtggcacttacttatgatcacagactgatagatggacgtgaagccgtgacattcttagtgaaaatcaaacaag ctgtggaagatccgcgagtgcttcttctaaatttatag |
|
Protein
| Protein ID | pfu_aug2.0_484.1_14212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14212.t1 MNDYDFQHSYDRTGIGTPVVCNNKLGKDARVLGSPCCKSSNHTNRLIHGSCYQSTVRCFHTSSPSLLETPGPCRLTTANL IPKNYKREFLQFFVEDRYVLQIKILDSDYKRINRKKFMFGKQNGDDEVKTMNTPTFAESITEGDIRWQKGDAPPPKTEAA PKKEAAAPPPEEKPTPPPADTKPAPPSSTAGPIPTQPPPSTPVPKAPMSSTPVSSLKPTPAPASAPDSAVKGSRGETRTK MNRMRKRIAQRLKDAQNSCAMLTTFNEVDMSNLMEMRKLYKDAFMKKHNLKLGFMSAFVKASAYALEDQPIVNAYIDDSE IVYRDYKDISVAVATPKGLVVPVIRNAETMNYADIERTIAELGEKARNNALAIEDMEGGTFTISNGGVFGSMMGTPIINP PQSAILGMHAIKDRAVVINGKVEVRPMMYVALTYDHRLIDGREAVTFLVKIKQAVEDPRVLLLNL |
|