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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_484.1_14214
Locus scaffold484.1 : 227285 ... 234573 : -
To GenomeBrowser scaffold484.1:227285..234573
Genes list of scaffold scaffold484.1
Synonym pfu_aug1.0_95939.1_06229

Manual annotation
Annotation by Blast2GO
Annotation GO
retinol dehydrogenase 13-like GO:0008152

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_484.1_14214.t1 gi|432861714|ref|XP_004069702.1| PREDICTED: retinol dehydrogenase 13-like [Oryzias latipes] 0.0
pfu_aug2.0_484.1_14214.t1 gi|658855812|ref|XP_008410555.1| PREDICTED: retinol dehydrogenase 11-like [Poecilia reticulata] 0.0
pfu_aug2.0_484.1_14214.t1 gi|617444792|ref|XP_007566453.1| PREDICTED: retinol dehydrogenase 11-like [Poecilia formosa] 0.0
pfu_aug2.0_484.1_14214.t1 gi|583988395|ref|XP_006789419.1| PREDICTED: retinol dehydrogenase 13-like [Neolamprologus brichardi] 0.0
pfu_aug2.0_484.1_14214.t1 gi|734601559|ref|XP_010727690.1| PREDICTED: retinol dehydrogenase 13-like [Larimichthys crocea] 0.0

Transcript
Transcript IDpfu_aug2.0_484.1_14214.t1
Definition-
>pfu_aug2.0_484.1_14214.t1
atgatgtgtccatactggcagacagaagatggatttgagatgcaatttgggacaaatcatcttggtcatttccttctcac
taacctactgctggccagaataaaagattcagcgccggcccgtattattaatgtatcttctcttgtccatagtcgtcctg
ttacatttgattttgatcatctaaatgatgagaaaacatatcgtccaatcacagcctatcagcagagtaaattagccaat
gtcctatttacaagggagctcagtaaaagactggcagattctggtgttacagctaattctgttagtccagggttttctaa
aactgagcttggacgacacctatctcttaccattcctcgaatatggaggtacctttccaaacctctcttcatgtttgcca
agtctcctacacaaggggcacaaactacgatttactgtgcagtatcggaggaactggtgcatgttagtggaaaatatttc
agcgactgtgcaatgaagaaagaaggccaggcagcacaagatgatgtagcagcaaaaaaactttgggaaatctctgcgaa
aatggtcggacttgcataa

Protein
Protein IDpfu_aug2.0_484.1_14214.t1
Definition-
>pfu_aug2.0_484.1_14214.t1
MMCPYWQTEDGFEMQFGTNHLGHFLLTNLLLARIKDSAPARIINVSSLVHSRPVTFDFDHLNDEKTYRPITAYQQSKLAN
VLFTRELSKRLADSGVTANSVSPGFSKTELGRHLSLTIPRIWRYLSKPLFMFAKSPTQGAQTTIYCAVSEELVHVSGKYF
SDCAMKKEGQAAQDDVAAKKLWEISAKMVGLA

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