Gene
| Gene Model ID | pfu_aug2.0_484.1_14217 |
|---|---|
| Locus | scaffold484.1 : 285363 ... 299383 : - |
| To GenomeBrowser | scaffold484.1:285363..299383 |
| Genes list of scaffold | scaffold484.1 |
| Synonym | pfu_aug1.0_1437.1_15493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_484.1_14217.t1 | 1 | 1 | HECT | 463 | 735 | 1.4e-18 | 67.1 | 1.8e-22 | 2.7e-18 | 66.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_484.1_14217.t1 | gi|597797274|ref|XP_007260208.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like isoform X1 [Astyanax mexicanus] | 1.00053e-42 |
| pfu_aug2.0_484.1_14217.t1 | gi|658876546|ref|XP_008421285.1| | PREDICTED: uncharacterized protein LOC103473106 isoform X2 [Poecilia reticulata] | 6.0e-33 |
| pfu_aug2.0_484.1_14217.t1 | gi|658876544|ref|XP_008421284.1| | PREDICTED: uncharacterized protein LOC103473106 isoform X1 [Poecilia reticulata] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_484.1_14217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14217.t1 atggaaattcaggatacaaatacagtatgtacgattaaaatggcggctaaagatcttgccgattttttgaaggaagaagg agttttagacttatatacagaaaaaattctccaagacaagatcgactgtaaggctttattgctggttgacaatgaaacac tcaagaactatataccagcctatggagaccaattaaaagcaatagccttttgcaaattgaaaacagacagtacacttaca gacactggttctgatggagcaagcttaagtgatgaaaaagttctggaccgcctcaaatctaaagttagaagggacccaaa aaagatgcagctgggaaatagaaatgcactaaaaagtaaaaggagggtagaattaggttggatggattttaatatgtcca cacagacatttaagcaagttcggaccaataaaggtggaggaactagacacctgctagttgataaacaagatactatggaa caaattctaacagtgggaaaaaacatgttttttccaaatggttattcaaatataggagatgtgaatgaatttcatacaga aatgaaggattttcagggaaggcatatgtccttatctttaacagttgaagaagcatatgacatctcaaagttgcgaattc ttagactttacctatatacaacaaacaaaagagccaatatcattggagaacaaaacaaagaagaaatggatgatgatcaa tctatcaatgattgtaagatggagatccaagattcagggactcctacagtaattttcaataggagactaagatttgcccc tactgatgaatccttcagtattaaggagactgaagcagcagataccacttcctcgactttgacaattagaaggagaaatt tgtccctaacacatagacgtgaggaagctaatatggctaaccagctaagggaaggaagcagccagctgtcagggagccaa aactgtcatgaatcagatatcattatagaagatgattatcagaatgtcaatgatgaaagagatgctgaactgcaggaagt catcagaaaaagtcttgaaagcacagtgtacgagggttgtcccagaaaaactccagaccaaacactacaaggaattcttc agtggtggattggaaaaacactggtgaaagatgatgaaataactgaaatccttgtgcagaggggaagagttttatcttct actttaagggtgatgtctcgacctagcttcaaactcacttcaccgatgaaatgtgtttttagtggagaaagtggggatga cctaggaggtccaagtagagaatacttcagagaactgatgaaagaaattgaagttgacatattacaaggaagtgaatcgg actgtaaattctttcaacatgacattaaaaagattgaagaaaaacactatgaaacggcaggaaagctgatttcgtatagc attttacatggtggaccaagcctacaggtcttcaattaccatcttgtgcatttgatgtttgatcaaaacatcaatttatc tgacttccccttgaatcatctggactttgatttaaaagaaaagctccttgagattcggaatgcatcaactcaagaagaac ttgatgccttgtgtgtcaataatgcagattggatcattgatcaagggctcacttcagtaaacctgaaaatgaaagacaag gagaagatagtgagcatgctaataaaaaatgaaatcttttatcgtgtccacagagagattacacagtttttaacaggatt gaatgtcaacggactgtgtgatgcctttgccctgtctagcatcccaagagaaatacttcaacttttcatcccagatcaga agaaaatgactttcatgaacatgagaggattgtatgatatccagtttagtgaagagggatcaaatgacagaaaaagagaa aacgatgtaatttattgtcttgaagcgttcttgtcagattgtgaggctggaatcactgatgtatcacttgaggaaatgct ggtgttttggacaggggccgaaaaaccacctcctcttggctttgatcagaagcttcaagtgacctttgtgtcaaatgaaa aattccttcttcctgttgcacatacatgcggaatgtatttagaactgtggcgtgggttttcagaccctgatgaatttaga cagaagatggtgcaagctatcactttaggaggagggtttcatcttgcttaa |
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Protein
| Protein ID | pfu_aug2.0_484.1_14217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_484.1_14217.t1 MEIQDTNTVCTIKMAAKDLADFLKEEGVLDLYTEKILQDKIDCKALLLVDNETLKNYIPAYGDQLKAIAFCKLKTDSTLT DTGSDGASLSDEKVLDRLKSKVRRDPKKMQLGNRNALKSKRRVELGWMDFNMSTQTFKQVRTNKGGGTRHLLVDKQDTME QILTVGKNMFFPNGYSNIGDVNEFHTEMKDFQGRHMSLSLTVEEAYDISKLRILRLYLYTTNKRANIIGEQNKEEMDDDQ SINDCKMEIQDSGTPTVIFNRRLRFAPTDESFSIKETEAADTTSSTLTIRRRNLSLTHRREEANMANQLREGSSQLSGSQ NCHESDIIIEDDYQNVNDERDAELQEVIRKSLESTVYEGCPRKTPDQTLQGILQWWIGKTLVKDDEITEILVQRGRVLSS TLRVMSRPSFKLTSPMKCVFSGESGDDLGGPSREYFRELMKEIEVDILQGSESDCKFFQHDIKKIEEKHYETAGKLISYS ILHGGPSLQVFNYHLVHLMFDQNINLSDFPLNHLDFDLKEKLLEIRNASTQEELDALCVNNADWIIDQGLTSVNLKMKDK EKIVSMLIKNEIFYRVHREITQFLTGLNVNGLCDAFALSSIPREILQLFIPDQKKMTFMNMRGLYDIQFSEEGSNDRKRE NDVIYCLEAFLSDCEAGITDVSLEEMLVFWTGAEKPPPLGFDQKLQVTFVSNEKFLLPVAHTCGMYLELWRGFSDPDEFR QKMVQAITLGGGFHLA |
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