Gene
| Gene Model ID | pfu_aug2.0_486.1_20827 |
|---|---|
| Locus | scaffold486.1 : 115696 ... 120106 : + |
| To GenomeBrowser | scaffold486.1:115696..120106 |
| Genes list of scaffold | scaffold486.1 |
| Synonym | pfu_aug1.0_6.1_57886 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_486.1_20827.t1 | 1 | 1 | Tetraspannin | 9 | 235 | 0.0 | 159.5 | 0.0 | 0.0 | 159.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_486.1_20827.t1 | gi|676464661|ref|XP_009056992.1| | hypothetical protein LOTGIDRAFT_233185 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_486.1_20827.t1 | gi|524885577|ref|XP_005099394.1| | PREDICTED: tetraspanin-3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_486.1_20827.t1 | gi|291232527|ref|XP_002736204.1| | PREDICTED: tetraspanin-3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_486.1_20827.t1 | gi|557320100|ref|XP_006033198.1| | PREDICTED: tetraspanin-3-like [Alligator sinensis] | 0.0 |
| pfu_aug2.0_486.1_20827.t1 | gi|729768232|ref|XP_010581321.1| | PREDICTED: tetraspanin-3-like isoform X1 [Haliaeetus leucocephalus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_486.1_20827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20827.t1 atggcgtctggttgtacagttacctctaagatattcctttgggcgttaggacttatattttggggagccgcagcaggatt attttttgtgggaggatgggtgttctcaacctacaaacattacaatgagatcacagaggccaactttaccctgataccag ctgttattatcatttgtgtgggcgtcttcctctttattattggcatcactagctgtgttgcagcttgtaaggaaaacaag tgtctcttggcttgtttgttctcaatgctactggttgttctcacagcagagataggagctggagccctgggttatgcctt caggaaagatgtagcggatgctgttgagaatggcctacacaaggcaatcagagaatatgaaagcggaacacttaaagatc aagttgactacttacaaaaagagttacactgctgtggattcaccaacgcatcagattggtttaaacctgatacaaaatgg caccttaaccatacctacgtccctgaaagttgctgtgcacactcaaattgttccctacaatcaaggacattgacatcaaa ctccacagcattctatgaagagggatgctacaacaagcttgaggatacactacagtcgaatctggcctacatagcaggaa ttgctattacatttgctgtaatccagatcctaggaatgattgccagttgcgtattattctgccgatccaaggaagtgaag tatgagccacttggaggtcaatatccaggactgagggtctaa |
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Protein
| Protein ID | pfu_aug2.0_486.1_20827.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20827.t1 MASGCTVTSKIFLWALGLIFWGAAAGLFFVGGWVFSTYKHYNEITEANFTLIPAVIIICVGVFLFIIGITSCVAACKENK CLLACLFSMLLVVLTAEIGAGALGYAFRKDVADAVENGLHKAIREYESGTLKDQVDYLQKELHCCGFTNASDWFKPDTKW HLNHTYVPESCCAHSNCSLQSRTLTSNSTAFYEEGCYNKLEDTLQSNLAYIAGIAITFAVIQILGMIASCVLFCRSKEVK YEPLGGQYPGLRV |
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