Gene
| Gene Model ID | pfu_aug2.0_486.1_20831 |
|---|---|
| Locus | scaffold486.1 : 164057 ... 196406 : + |
| To GenomeBrowser | scaffold486.1:164057..196406 |
| Genes list of scaffold | scaffold486.1 |
| Synonym | pfu_aug1.0_6.1_57881 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_486.1_20831.t1 | 1 | 1 | PAP_assoc | 403 | 467 | 1.9e-12 | 46.9 | 7.0e-16 | 5.2e-12 | 45.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_486.1_20831.t1 | gi|676445780|ref|XP_009050864.1| | hypothetical protein LOTGIDRAFT_64710, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_486.1_20831.t1 | gi|524910929|ref|XP_005110337.1| | PREDICTED: poly(A) RNA polymerase GLD2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_486.1_20831.t1 | gi|675891072|ref|XP_009031038.1| | hypothetical protein HELRODRAFT_194626 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_486.1_20831.t1 | gi|170592965|ref|XP_001901235.1| | PAP/25A associated domain containing protein [Brugia malayi] | 0.0 |
| pfu_aug2.0_486.1_20831.t1 | gi|312070196|ref|XP_003138034.1| | PAP/25A associated domain-containing protein [Loa loa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_486.1_20831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20831.t1 atggtcagtggcagttgtttactcatttccagagtgtttgaaataatttctggaagcatagtgaaaataactttaccata tcattatgaactcttgttgagaacaatgttcagaccaaggtttcgaggaagaggtttttctaatgcattaattccaaatc cgcatggacaaaattttcctgcctttcatcaaccatatcaacgccatgtgaacaatggacccttttttctaactaatcaa gtcaactatgggtttacacatggacatcaaccgcagggaccagtatataactacccccaggataatgttcctttatataa ccagacataccctgtacagcaggtcaggtttcaacagaatcaggaaggagttggtgttcaccaacaaccagggcagcaag agagatccaatagaaaacgtcatcttgacattgaggaggatagtaggagcaaaaggtcgcgagaaaatgacaatgccaca aatgttaccattcaggatgtacctctccctccaccagactattcaagaaattccttgattagccagaaaataatcgaaaa ctttgttcaaaaccatcaaacagaacaagactacaataggaagttacatctacgagatgctttgtatacaatactacaag gagtcattcccaattgtggtttgtacattgtcgggtcctccatgactggattcagcaccacaaagagtgacatggaccta tgtctagtcataagtgatcaagagattgatcagcggagagaagctgtagaatttctttatttgattcaaagagctctttc aaaatgttcattcctctctaattcccaggtcattagggcaaaagttcccattcttagaatttttgatttaataggaaaaa tagagttggatctcaatattaatagtacagttggagtaaggaacacacatttattaaagttttacagtttagctgattgg agggtccgtccattaatactctacatcaagaagtgggctcgttttcatgacattaatgatgccaggaaaaagaccttatc aagttatacactgtctctaatgatgattcattatttacaatgtggtgtttctcccccagttcttccagtattacagaaaa tgcatccagacgtgttttctactgacagagatatccgagatcttagttttgacaccagtattgtctttaagagtgagaat gaacagacactgggtgatcttttcctgggattcttggattactatgctaactcattcaactatgaagaagactgtgtatc tgtgagattgggtttgaaaacaaatgccaagactgccagtcaaagggtgacccgtcataatctgataatgacttatgatg gctatcaacttgctgttgaggaaccgtttgatctctccaacactgccagatcatttcataccaaatatagtggggacaga gtgaaacgagtgattcgtgttagttttaaaagactgaacgcaaaaagggatccagagtgtttatttcaaagtcctttctg a |
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Protein
| Protein ID | pfu_aug2.0_486.1_20831.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20831.t1 MVSGSCLLISRVFEIISGSIVKITLPYHYELLLRTMFRPRFRGRGFSNALIPNPHGQNFPAFHQPYQRHVNNGPFFLTNQ VNYGFTHGHQPQGPVYNYPQDNVPLYNQTYPVQQVRFQQNQEGVGVHQQPGQQERSNRKRHLDIEEDSRSKRSRENDNAT NVTIQDVPLPPPDYSRNSLISQKIIENFVQNHQTEQDYNRKLHLRDALYTILQGVIPNCGLYIVGSSMTGFSTTKSDMDL CLVISDQEIDQRREAVEFLYLIQRALSKCSFLSNSQVIRAKVPILRIFDLIGKIELDLNINSTVGVRNTHLLKFYSLADW RVRPLILYIKKWARFHDINDARKKTLSSYTLSLMMIHYLQCGVSPPVLPVLQKMHPDVFSTDRDIRDLSFDTSIVFKSEN EQTLGDLFLGFLDYYANSFNYEEDCVSVRLGLKTNAKTASQRVTRHNLIMTYDGYQLAVEEPFDLSNTARSFHTKYSGDR VKRVIRVSFKRLNAKRDPECLFQSPF |
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