Gene
| Gene Model ID | pfu_aug2.0_486.1_20833 |
|---|---|
| Locus | scaffold486.1 : 256205 ... 278429 : + |
| To GenomeBrowser | scaffold486.1:256205..278429 |
| Genes list of scaffold | scaffold486.1 |
| Synonym | pfu_aug1.0_25474.1_40571 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuronal acetylcholine receptor subunit alpha-7-like precursor | GO:0005230 GO:0005886 GO:0006812 GO:0034220 GO:0044425 GO:0045202 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_486.1_20833.t1 | 1 | 1 | Neur_chan_LBD | 26 | 215 | 9.80909e-45 | 152.4 | 0.0 | 9.40271e-43 | 145.8 |
| pfu_aug2.0_486.1_20833.t1 | 2 | 1 | Neur_chan_memb | 223 | 454 | 5.8e-34 | 118.0 | 9.1e-38 | 6.7e-34 | 117.8 |
| pfu_aug2.0_486.1_20833.t1 | 2 | 2 | Neur_chan_memb | 457 | 517 | 5.8e-34 | 118.0 | 0.31 | 2300.0 | -1.8 |
Transcript
| Transcript ID | pfu_aug2.0_486.1_20833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20833.t1 atgaacctggtgttcctgattggaattattctatgtcacaatgttctagtaataacttgtgtagaactgaatacctcagc cctcatggacaaactatttcagaattatcacagcgatgttataccaatatgctcccaatctgacactgtccaaacaaagg ttggcatggcgctcagacagatcatagagctgagatggacagactgtcggttgatttggaatgaaacaacatatggaatc agccagctgattgttcccttctccaaggtgtgggtgccagatattactctgtatgataatgcgaacagcgaattagaggg cctgaaggactaccgtccagctataggtagtgatggcagtatgtcctataacttcccttccatcatatcaagtttgtgta aggtagatgtgacttactttccctttgatacacaaatctgcgttctgaagtttggatcctgggcatatcacggactggag ttaaacgtcaccacactaagcgacacaggtgacctatcttcttttgtcacaaatgttgagtggtacgtaacgcgcgtacc cgcaaagcgtgacgtcatcacatatggatgctgtcccgaaccatatccggatgtaactttttatgtcaccctagaacgta aaccattgttttacatattaaatttgctcttcccgtgtatgctgatttctaccgtagcttgcctaggcttccttcttcca ccggacagcggagaaaaggtttctcttgagatcactgttcttctgtccttggcagtcttccttctggttgtttcagagac gatgccgccgtccagtgaaacatttccatacataggtatatacttcgcttgcgccatgttgttagtgtcactctcttgtc ttatgacagttacagtgctgaatctacattttaaaggaagccatggaaaacaaatgccaatattcattcgcagaattttc ctggaatttttgggcaaagtagtttgtgtcaagataaacagagaaagaaaacctcagcggatacatgctgtaggtcctca aaatggtaatgcattcatgtacgataataaatcattcgaaagtatacacgagaccaaaatgaatggccatgatcgaacgc ggaataatacaactcgacataacggggtgacgtcacgagccaatactctacaggaaatatccataggagatgtatcagag tcggaatcggaaacttcagttccagttccagatgtgttaagtctaaaacattctttccagtcattgttggaagctgtaca taacattgaaaaatttatgatggacaagaagaagcaaacagactacatagaagaatggcaacttcttgcacaagttttag atccgaaaaaaaagtctaataaactaaagtgtgacggacagacggacagacttacagacagacagacagacagacggacg gacggaaagacagacagacagagggacagacagacagacagagtggaagctataagtcccctccggcgagccgatgttcc gttcagatcacaaagtcctaaattggataacgttactgtgcagaaaaaaacagagagacggacagacgcttaccgacgtc gccgtctagttttgttacccgtgcaaactcttttgctggaaaaaatgatggaaaataatcgcttgcgaatgtctttgctt gttttgtacgtcatgcttctgacgtggtcggcttacagagcaactgtagccgttgttgactacagtcaatgcattgaaga agaaagtaccgtatggcagcagatactgatttggatgagtttaatgaaaaatacaccgaaatgtccttcactcaccgatg ttacaatgggaatcggatgtgacattcttctgctcatggctgttgtcgtggtgtgtgaggcgatcaaattggtttggaaa atcttcacttcagatgagagtgtaccacaagagacgcatgacaaagtgaagccaaaggggaaactttacttgatgcggga agcttcaaggcgtactggacttataatattcgccagagttactgacaacaaagaagaaattctcagctacaatccccaca ccagaaagatcaggatgataatggtccttcccaggctgacggaggaggaatacaactcaatctttaattga |
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Protein
| Protein ID | pfu_aug2.0_486.1_20833.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_486.1_20833.t1 MNLVFLIGIILCHNVLVITCVELNTSALMDKLFQNYHSDVIPICSQSDTVQTKVGMALRQIIELRWTDCRLIWNETTYGI SQLIVPFSKVWVPDITLYDNANSELEGLKDYRPAIGSDGSMSYNFPSIISSLCKVDVTYFPFDTQICVLKFGSWAYHGLE LNVTTLSDTGDLSSFVTNVEWYVTRVPAKRDVITYGCCPEPYPDVTFYVTLERKPLFYILNLLFPCMLISTVACLGFLLP PDSGEKVSLEITVLLSLAVFLLVVSETMPPSSETFPYIGIYFACAMLLVSLSCLMTVTVLNLHFKGSHGKQMPIFIRRIF LEFLGKVVCVKINRERKPQRIHAVGPQNGNAFMYDNKSFESIHETKMNGHDRTRNNTTRHNGVTSRANTLQEISIGDVSE SESETSVPVPDVLSLKHSFQSLLEAVHNIEKFMMDKKKQTDYIEEWQLLAQVLDPKKKSNKLKCDGQTDRLTDRQTDRRT DGKTDRQRDRQTDRVEAISPLRRADVPFRSQSPKLDNVTVQKKTERRTDAYRRRRLVLLPVQTLLLEKMMENNRLRMSLL VLYVMLLTWSAYRATVAVVDYSQCIEEESTVWQQILIWMSLMKNTPKCPSLTDVTMGIGCDILLLMAVVVVCEAIKLVWK IFTSDESVPQETHDKVKPKGKLYLMREASRRTGLIIFARVTDNKEEILSYNPHTRKIRMIMVLPRLTEEEYNSIFN |
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