Gene
| Gene Model ID | pfu_aug2.0_49.1_30066 |
|---|---|
| Locus | scaffold49.1 : 15746 ... 27597 : + |
| To GenomeBrowser | scaffold49.1:15746..27597 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_4394.1_59513 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30066.t1 | 4 | 1 | DUF4205 | 13 | 109 | 1.4013e-45 | 155.8 | 1.2e-13 | 1.9e-10 | 40.0 |
| pfu_aug2.0_49.1_30066.t1 | 4 | 2 | DUF4205 | 184 | 260 | 1.4013e-45 | 155.8 | 1.5e-14 | 2.4e-11 | 42.9 |
| pfu_aug2.0_49.1_30066.t1 | 4 | 3 | DUF4205 | 260 | 313 | 1.4013e-45 | 155.8 | 4.4e-19 | 7.2e-16 | 57.8 |
| pfu_aug2.0_49.1_30066.t1 | 4 | 4 | DUF4205 | 388 | 448 | 1.4013e-45 | 155.8 | 8.8e-06 | 0.015 | 14.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30066.t1 | gi|676435421|ref|XP_009047551.1| | hypothetical protein LOTGIDRAFT_225148 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_49.1_30066.t1 | gi|749785703|ref|XP_011146546.1| | PREDICTED: protein FAM188A homolog [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_49.1_30066.t1 | gi|759073919|ref|XP_011346627.1| | PREDICTED: protein FAM188A homolog [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_49.1_30066.t1 | gi|527270345|ref|XP_005153127.1| | PREDICTED: protein FAM188A [Melopsittacus undulatus] | 0.0 |
| pfu_aug2.0_49.1_30066.t1 | gi|701302138|ref|XP_010011609.1| | PREDICTED: protein FAM188A [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30066.t1 atgcctcaggccttgcagtattttaacgtgtcacaacatgaaagggaaaggtttacctttagtgagtaccaggcgacagc actagtccagtatgaaggtggaccttgtgcagttattgcccctgtccaggcatactttctgcagaatttacttttcaatc tggatattgaagacctttctacaattccagaggaacagtgcaatgaagccctactacagtcacttggagatatactcata gacgttaattctaccggcaaattctttgtagtcagtcttcaagacactataatatcagacgctaaaaatagtgaaaaatg cacaaactcatcaaaatttccttctttgataaaaaatgctgaaaatgaaggtgaaataatagaaacaaatgcagagaatt ctcaggaaaatacaacaagctcccaaacggaacagcccgttagcaatactcagggatcccgccccacttctgctcatagg gaaaaaacgtcaagtcccagaagtaaggacgaagatcaggaaacggaagaagatacggaacatagagcgaaacgacagcg accagaaaatgatgtcttccacagcagactcaaatgtactgagtgtgatagtgttgaatccatgaggaatacaatgaagg ccatcgggaaattatatacagatagctatggtgtaatacttttcatgtattctgctattttatccaagggagtagaacag atcaggaatgaaatggaagatgcaggagaccagctgatcgatcatattcatgggcatggcagatgtaagatcggcttcct aacgttaatggaacatttaaggtattgtgaggtaggatggtaccttaaaaatcccagctttcccatctggatcattgcaa gtgagacccacctaactgtgctgttctctaaggagaagaatctggtatcatgtgaaaatgaagcatcaaatgccaaagtc atattccagtcatttgatccagaaggaaatggttttatcaatacagcatgtctaggagatctacttagtgccttagacct tgtctctgagaaagaatacgtagacattatgaaaacaaagttggattccgaggaccttggcattataaccttgacctcat ttatggacgagttttatccaggacaggacaaaacagaacagccgtcgacatttgaattattgcactggaacgggctctcg aggtcgtcaacagatggcaaggtgatgtactcaagagggaaagctactgtcccagaagaaatggaattacaaataattac agatttatctcccatgatcatgtgccttcggacaaaatggccaacgatggaactgcaatgggagaatgaacgaataccgt cactaaattga |
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Protein
| Protein ID | pfu_aug2.0_49.1_30066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30066.t1 MPQALQYFNVSQHERERFTFSEYQATALVQYEGGPCAVIAPVQAYFLQNLLFNLDIEDLSTIPEEQCNEALLQSLGDILI DVNSTGKFFVVSLQDTIISDAKNSEKCTNSSKFPSLIKNAENEGEIIETNAENSQENTTSSQTEQPVSNTQGSRPTSAHR EKTSSPRSKDEDQETEEDTEHRAKRQRPENDVFHSRLKCTECDSVESMRNTMKAIGKLYTDSYGVILFMYSAILSKGVEQ IRNEMEDAGDQLIDHIHGHGRCKIGFLTLMEHLRYCEVGWYLKNPSFPIWIIASETHLTVLFSKEKNLVSCENEASNAKV IFQSFDPEGNGFINTACLGDLLSALDLVSEKEYVDIMKTKLDSEDLGIITLTSFMDEFYPGQDKTEQPSTFELLHWNGLS RSSTDGKVMYSRGKATVPEEMELQIITDLSPMIMCLRTKWPTMELQWENERIPSLN |
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