Gene
| Gene Model ID | pfu_aug2.0_49.1_30068 |
|---|---|
| Locus | scaffold49.1 : 47886 ... 94335 : - |
| To GenomeBrowser | scaffold49.1:47886..94335 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_3406.1_66675 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30068.t1 | 3 | 1 | zf-met | 633 | 652 | 3.5e-07 | 30.2 | 0.00027 | 2.0 | 8.7 |
| pfu_aug2.0_49.1_30068.t1 | 3 | 2 | zf-met | 789 | 813 | 3.5e-07 | 30.2 | 1.0e-09 | 7.7e-06 | 25.9 |
| pfu_aug2.0_49.1_30068.t1 | 3 | 3 | zf-met | 881 | 904 | 3.5e-07 | 30.2 | 0.015 | 110.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30068.t1 | gi|676440347|ref|XP_009049148.1| | hypothetical protein LOTGIDRAFT_238678 [Lottia gigantea] | 2.0e-39 |
| pfu_aug2.0_49.1_30068.t1 | gi|198421763|ref|XP_002124793.1| | PREDICTED: uncharacterized protein zf(u1like)-5 [Ciona intestinalis] | 7.0e-15 |
| pfu_aug2.0_49.1_30068.t1 | gi|93003072|tpd|FAA00119.1| | TPA: zinc finger protein [Ciona intestinalis] | 1.0e-14 |
| pfu_aug2.0_49.1_30068.t1 | gi|620970335|ref|XP_007659861.1| | PREDICTED: uncharacterized protein LOC100681683 isoform X2 [Ornithorhynchus anatinus] | 1.0e-13 |
| pfu_aug2.0_49.1_30068.t1 | gi|620970321|ref|XP_007659853.1| | PREDICTED: dentin sialophosphoprotein-like isoform X1 [Ornithorhynchus anatinus] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30068.t1 atgatgaagggagttccgaagaaaaagggcaatgccaaattggttacaaattctaacttcactaatgtgcacaattcagt atcagaaaacacagaaaataatcgaactttgactaaaggtggtaaagactcacaaagtcatggttgtgaaaagtgttttg agacagaaaaaactcctgtaggtaaaaaaggtaatggtgaaaaggcaggtttaaaaagtgatgtaagagatactggcaaa acagcaaatgtggcatgtgatacaagtataacatgtagagaggaaaaaacacaaacacagcagaaacgggggaggaaaag gaaatctcccattgctagtgattcctcattgaccatgagtaaaaggatcaaaaggcagacaaatcaaggaggaaatgaca tagatctacccagtaatccgtccaaagatactcctaaagtaggtaagaagaagggaaggaagagggcacaaaataatgac acattatcaaagtatggacctactgaaacaagaaataatgtgaaaaaatcgtcatgcaggaaaaataaacagtcaggtaa tgatttaaaacatgaagaagtagaaactgtgatctttgatgaagagttacctactttaacccgggtcaacaaaaactcat atcagaaggcagaaaacacacaaagaaaagcagaaaaaacacagttaaaggcagcaaaaacacaaccaaaagtgagacaa gcaaagcaaaagacagataaaaagcaatcagagtcagctaaaccaagaggacgaaaaaagaaagccaagaagagccagaa agatgataacagcgtctcaagtagctccactactataaaaggtgttccctcttccccttcagacaatattactgcaagta gctcccccattccgtttccaagaaatatcaatgacagtgatgatatcttggccagaagtcagccaattccattatgccct gagagtgatgatctattagccagtagtcaaccaattccattacaacctgaaagatcatttgcactgagcaaaaagaatcc tcgatcagaaatgaattccgaagaagaaatcacagatagcattgactctggattggatattgaaactaatattgatcaaa tgccatttctgctgattgatgaagactcattagacagaaaccacgcagaagacacacattcagagaatatctcattaatt ttggaaaattctgattatttacctacaccaggatcaccctataaacagtacaaataccagtccacaaacaaaagtgttga ttggtctgaaagctttacaaatctggatgacatcagcctgtcagacagtgacgaggaactacctgaggttctcactccaa tatcacatgaagatcctgacaataacctcaacagcactcacaaaagaggtgggatcagtgttgattggtctgaaagcttt acaaatctggatgacatcagcctgtcagacagtgacgaggaactacctgaggttctcactccaatatcacatgcagttgt tggaaaggaagatgagaaaattcaagaggaagctatcacaaagaaagaggaagctatcacaaagaaagaggaggaggtac aaagcgaagttgagggtacgcagggtgattcagtagaagctccgattcagataacggaaacaaacggacagaccccgagc atggtaggcgggacaacttaccaagatacgggaggagccatgcaagaaaagccagttgtcatggtaacagaggatcaaac tgggcatgctcagaagatgggacttgttgaaaattatgaagatgttggaggagcaatgcaagaggagcaggttgctacgg ttatagagggaggggaacaagaagaggaggaagaagaagaagaagatactggtttctgtaaatactgcaaaatgagcttc gcaagtgatgatgcttactggaaacataccagaggactccttcatacccagaagctgatggagttagaggggggccataa ggacgaccctgggaatcaagaccaagaaaatagtacgacaggtaacaacagcggtacatccagctacaatcagcacggag gatacaatgaggaagagaattatgaggactatgggggatatgaggaaggggatgaggaatatggaggatcagggtatgag gcaggaggctatgggaagcaaggaagaggaagctacatggcccagaacaagtttaagcctacgaagggaggaaacacgag ggaggaagggtacgacttcaacacgtcaaactggatggacatagataaaccggagcctaagatgcccctagatcagagag acttttttccggatgatattggcaggacgcagttccctgatgaattttactgtcagatttgtgacattagatgtacgggc agtgtgacctttcagatgcatacagagggatctaaacataaactgaaagtggaacaatataaaatgatgggtgaacgtgg acaggttaagatagacacaccacagaccgtcaagccgcgggtcatcgactcaaacagggaggctaaattacacggaacca taaagaaatatgatgttccaataataggtttacagtttgtaacagagttccagaaggcagaccctgctggtgcggtgcga tatgtgtgtaacttgtgtgagtctaagtgtgacggtaacacgatagtagcacatcttactggtcacaaacacagggtggc atactttaaagaatgccgacctgacatccacagcctaataacaatccatcattcaagtaagaagaagtcagaggtgagcg cagcttccgaacagttcgccaaggacgttcaagacaaagatggaatgggcaaggtcaaggtcaaaatcgagatcgacaaa gctacggaaaaagccacgtctagactcctgaaatctggtggtatggagtttgacagcctgctagagaaaatacaaagctc aagtgatgcaggggctgaattcagtgcctcccagggtccagataacaaaagacccaaactgaaatcatctggatatgaca gctttgatccggaagccgcaagaaatattggtttcagtaagactctgggtaggaagctcccacaaccagagtattcagac tacggaaaaaccaaaacagatcactatcaaagcatgaacgaagggctttcgcacctttatgataacgaattccaagattc atcaagaaaaaggccattcagtcatatagacagaccatcaagtgatgttatgcctgtgagagggaatccatttaggcaag gctcaagctatgcaggacagacagacagccagtatggaacagcagacagacatactgaccaaccgcaccttcctgataga gaacggcagacgtacagacctggcgaaccgtatcagtatagaacaactagtagaccacctgtatcaactccctatagtgt aacggacagacagtcagacagacccccatacagtgccactgacagacaaaagagaccgccatatggtaccacagacagac aaagtattacagacagaccaccatatggtaccacagacagacaaagagctacagagagaccgccatatggtaccacagac agacaaagagttacagacagaccgccatatggcgcattgcagagaccaagtgttacagagagacagtcagacagacctcc ctatggcaccatggacagacgaacagaggtccctccctatggaaggccagatcacgcagatacatatacaaagaatcctg tagaagtttttgattatggacacagtaataaaaggactgaggagccccctccaaatactgaggttcaacctcatgttcag cctcatgttcagcagggagataaacagggagtagaggatgaggatacagaattattccaacaattcttaaactggaagag gcagcagaaagcagcaatgggagcaaactcctcagagaatacaaacacagcgagtgtagatcctccaagggaaaaaccaa aacctaagccaaaagaggaagacagtgctccaaatatttcagatatgctgttaaatttgtcaaactcaatgataaatacg gaagaagaagcggctatggcattacaagtctccaatgctctcactcaggctctgctacagtacaggctgaaacatgttcc caaggaattactgtcctctgaatctccagcttcgaaagctaagtcacctgcccagtcaagcagcacagctgtaaggcaac caaaatctcaggtacctgctgctccaaccaataatccttctgttaggaagcccaagtctcaggtaccagcaccacctcgt gcagctactactggacaaataaaacaagtagcacaatcaatatcaaccgtagtgagtgcaatggcttctacagactcgag tgcagctggcagtctaacgtctgccccagcaacaaatgtgacagcttatacatacggtacatatagtaccgggnttaaag aggattactga |
|
Protein
| Protein ID | pfu_aug2.0_49.1_30068.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30068.t1 MMKGVPKKKGNAKLVTNSNFTNVHNSVSENTENNRTLTKGGKDSQSHGCEKCFETEKTPVGKKGNGEKAGLKSDVRDTGK TANVACDTSITCREEKTQTQQKRGRKRKSPIASDSSLTMSKRIKRQTNQGGNDIDLPSNPSKDTPKVGKKKGRKRAQNND TLSKYGPTETRNNVKKSSCRKNKQSGNDLKHEEVETVIFDEELPTLTRVNKNSYQKAENTQRKAEKTQLKAAKTQPKVRQ AKQKTDKKQSESAKPRGRKKKAKKSQKDDNSVSSSSTTIKGVPSSPSDNITASSSPIPFPRNINDSDDILARSQPIPLCP ESDDLLASSQPIPLQPERSFALSKKNPRSEMNSEEEITDSIDSGLDIETNIDQMPFLLIDEDSLDRNHAEDTHSENISLI LENSDYLPTPGSPYKQYKYQSTNKSVDWSESFTNLDDISLSDSDEELPEVLTPISHEDPDNNLNSTHKRGGISVDWSESF TNLDDISLSDSDEELPEVLTPISHAVVGKEDEKIQEEAITKKEEAITKKEEEVQSEVEGTQGDSVEAPIQITETNGQTPS MVGGTTYQDTGGAMQEKPVVMVTEDQTGHAQKMGLVENYEDVGGAMQEEQVATVIEGGEQEEEEEEEEDTGFCKYCKMSF ASDDAYWKHTRGLLHTQKLMELEGGHKDDPGNQDQENSTTGNNSGTSSYNQHGGYNEEENYEDYGGYEEGDEEYGGSGYE AGGYGKQGRGSYMAQNKFKPTKGGNTREEGYDFNTSNWMDIDKPEPKMPLDQRDFFPDDIGRTQFPDEFYCQICDIRCTG SVTFQMHTEGSKHKLKVEQYKMMGERGQVKIDTPQTVKPRVIDSNREAKLHGTIKKYDVPIIGLQFVTEFQKADPAGAVR YVCNLCESKCDGNTIVAHLTGHKHRVAYFKECRPDIHSLITIHHSSKKKSEVSAASEQFAKDVQDKDGMGKVKVKIEIDK ATEKATSRLLKSGGMEFDSLLEKIQSSSDAGAEFSASQGPDNKRPKLKSSGYDSFDPEAARNIGFSKTLGRKLPQPEYSD YGKTKTDHYQSMNEGLSHLYDNEFQDSSRKRPFSHIDRPSSDVMPVRGNPFRQGSSYAGQTDSQYGTADRHTDQPHLPDR ERQTYRPGEPYQYRTTSRPPVSTPYSVTDRQSDRPPYSATDRQKRPPYGTTDRQSITDRPPYGTTDRQRATERPPYGTTD RQRVTDRPPYGALQRPSVTERQSDRPPYGTMDRRTEVPPYGRPDHADTYTKNPVEVFDYGHSNKRTEEPPPNTEVQPHVQ PHVQQGDKQGVEDEDTELFQQFLNWKRQQKAAMGANSSENTNTASVDPPREKPKPKPKEEDSAPNISDMLLNLSNSMINT EEEAAMALQVSNALTQALLQYRLKHVPKELLSSESPASKAKSPAQSSSTAVRQPKSQVPAAPTNNPSVRKPKSQVPAPPR AATTGQIKQVAQSISTVVSAMASTDSSAAGSLTSAPATNVTAYTYGTYSTGXKEDY |
|