Gene
| Gene Model ID | pfu_aug2.0_49.1_30073 |
|---|---|
| Locus | scaffold49.1 : 164541 ... 187023 : + |
| To GenomeBrowser | scaffold49.1:164541..187023 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_9985.1_17556 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30073.t1 | 1 | 1 | Arb2 | 33 | 183 | 4.0e-29 | 101.3 | 3.2e-32 | 6.9e-29 | 100.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30073.t1 | gi|241574826|ref|XP_002403141.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_49.1_30073.t1 | gi|524922642|ref|XP_005065576.1| | PREDICTED: protein FAM172A [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_49.1_30073.t1 | gi|725550992|ref|XP_010338731.1| | PREDICTED: protein FAM172A isoform X4 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_49.1_30073.t1 | gi|530380213|ref|XP_005272167.1| | PREDICTED: protein FAM172A isoform X14 [Homo sapiens] | 0.0 |
| pfu_aug2.0_49.1_30073.t1 | gi|530380205|ref|XP_005272163.1| | PREDICTED: protein FAM172A isoform X9 [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30073.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30073.t1 atgtcagaaaaggagcctgaagattataattttcccaatactttagaggaattcggatatcattttaatgaggagggaaa acttagaaacataaagacagaggagaaattcttgtttaatgtgaaagaaggagaccatcgttataatcagaaacattatg aggctttgggaaatataataacggagcacatttataagctgttagaggaaagatacaaactcaggaagataactttacca gtagatgcttctgatgatgaaccaacaacatttttctatgcctctgatgatgccctaaccaacccagacaagcttttggt gctgatacacgggtcaggagcagtaagggcgggacagtgggctaggagcttaatcatcaatgattgcttggactgcggca cacagtttccttacatcaaatggggcatagaaaacaactatggcattattgtagcaaatacaaacataaatgaagcaaca gtaaatggtcaagaagttgaaataaggggtagtaagtcaccagagatgcacacagaaagtatatggaagggatttgttca aaatgccaaggcaaaacaaattgccatagtggcccatagctatggaggagtctgtacattagagctggctatcaagttta caaatgagtttaaagatcgtgtctttgctgttgcactgactgactcagtacatagccttggtcatcaggaagcctctgaa gaagttatagagtactacaaggagagagctaagaactgggcatcatcatatgaccccctggacacaccactggaaaccag attggacagttgtcctacagtgtcagctggtacagacaaacatgaatacacaagttttagctgtatgcattctgtgttca agttctttgaagaaaaatactgtgagagaaatagttcccaattatctgttaagaaagaatctattaaaagtgactctaga tcagcagacggagaaaagtcatctgaaaacgctaaggcagctggacctaaggtagacaagggtgataactctgtgatgtc acaggatgtactgagtcaggatgatattaacatggcgtctcagtcacaagacatgcttagccagggagacacagatatgg catctcagtcacaagacatgcttagtcaagaagacatggggtctcagtctcagggagacacagatatggcatctcaggga gacacacacattccatctcgagatgtcaccagtgtgaagaaagaagaactctga |
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Protein
| Protein ID | pfu_aug2.0_49.1_30073.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30073.t1 MSEKEPEDYNFPNTLEEFGYHFNEEGKLRNIKTEEKFLFNVKEGDHRYNQKHYEALGNIITEHIYKLLEERYKLRKITLP VDASDDEPTTFFYASDDALTNPDKLLVLIHGSGAVRAGQWARSLIINDCLDCGTQFPYIKWGIENNYGIIVANTNINEAT VNGQEVEIRGSKSPEMHTESIWKGFVQNAKAKQIAIVAHSYGGVCTLELAIKFTNEFKDRVFAVALTDSVHSLGHQEASE EVIEYYKERAKNWASSYDPLDTPLETRLDSCPTVSAGTDKHEYTSFSCMHSVFKFFEEKYCERNSSQLSVKKESIKSDSR SADGEKSSENAKAAGPKVDKGDNSVMSQDVLSQDDINMASQSQDMLSQGDTDMASQSQDMLSQEDMGSQSQGDTDMASQG DTHIPSRDVTSVKKEEL |
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