Gene
| Gene Model ID | pfu_aug2.0_49.1_30075 |
|---|---|
| Locus | scaffold49.1 : 217101 ... 234468 : + |
| To GenomeBrowser | scaffold49.1:217101..234468 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_20532.1_54679 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30075.t1 | 3 | 1 | Arrestin_N | 7 | 40 | 1.4e-30 | 106.1 | 2.6e-08 | 0.00013 | 21.8 |
| pfu_aug2.0_49.1_30075.t1 | 3 | 2 | Arrestin_N | 44 | 108 | 1.4e-30 | 106.1 | 1.3e-26 | 6.3e-23 | 81.2 |
| pfu_aug2.0_49.1_30075.t1 | 2 | 1 | Arrestin_C | 51 | 102 | 5.9e-09 | 36.1 | 0.00047 | 2.3 | 8.3 |
| pfu_aug2.0_49.1_30075.t1 | 2 | 2 | Arrestin_C | 116 | 199 | 5.9e-09 | 36.1 | 1.7e-09 | 8.6e-06 | 25.8 |
| pfu_aug2.0_49.1_30075.t1 | 3 | 3 | Arrestin_N | 157 | 180 | 1.4e-30 | 106.1 | 0.36 | 1800.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30075.t1 | gi|198416010|ref|XP_002123090.1| | PREDICTED: arrestin domain-containing protein 3-like [Ciona intestinalis] | 5.99756e-43 |
| pfu_aug2.0_49.1_30075.t1 | gi|585646192|ref|XP_006811687.1| | PREDICTED: arrestin domain-containing protein 3-like [Saccoglossus kowalevskii] | 1.99965e-42 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30075.t1 atggggaagctgagagtgttcgacattgtactagacaatcatcagggagtatactttgctgggcagcatgtaaccggtag ggtcattgtggagcttgatgctccaatgaagatgagaggtatgggcagtgggggaaataaccatcttcaacaaggacagc atgcatttccattcagctttattcttccaccctcgttaccatcatcattcgagggaggtgtgggttatgtgcggtacacc attaaagcaaccatagacaaaccatggaagtttgatcataatgtaaaacgtccattcacagtggtggctttactagatct gaatctacaaccaaatgccatgacaactacatttcatgccacaaccaaatccagatctgaccataaggaagtagcgcggg tcgtccatgatgaggtagcaccaggagatagttcttcatggggtggatctagactcatcattcctgctttacctccatcc ttccttgtgggatgtaacattatagacatcagatactatttagagctgatcatagacccttcaggacctgccttcaaact ccatgtaccattggagataatcatagggacgattcccctaaatgctattgtacatcaacatgcacaacagcaacagtatg gtctaccacctccacagggggcaccacattacggactatcagaaggagctactgctccccctgcaccatctgctcctgag atgcctccccctagctacagtgattgtgtgctgggtcaggtcagtatcaaggataaggaggataatgactacacaagagg tgacatgaactacactccgaagtacccatattatgattggtcaaagtag |
|
Protein
| Protein ID | pfu_aug2.0_49.1_30075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30075.t1 MGKLRVFDIVLDNHQGVYFAGQHVTGRVIVELDAPMKMRGMGSGGNNHLQQGQHAFPFSFILPPSLPSSFEGGVGYVRYT IKATIDKPWKFDHNVKRPFTVVALLDLNLQPNAMTTTFHATTKSRSDHKEVARVVHDEVAPGDSSSWGGSRLIIPALPPS FLVGCNIIDIRYYLELIIDPSGPAFKLHVPLEIIIGTIPLNAIVHQHAQQQQYGLPPPQGAPHYGLSEGATAPPAPSAPE MPPPSYSDCVLGQVSIKDKEDNDYTRGDMNYTPKYPYYDWSK |
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