Gene
| Gene Model ID | pfu_aug2.0_49.1_30078 |
|---|---|
| Locus | scaffold49.1 : 264191 ... 294254 : + |
| To GenomeBrowser | scaffold49.1:264191..294254 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_14109.1_32398 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30078.t1 | 2 | 1 | MMR_HSR1 | 176 | 246 | 2.2e-14 | 53.3 | 0.042 | 150.0 | 2.3 |
| pfu_aug2.0_49.1_30078.t1 | 2 | 2 | MMR_HSR1 | 369 | 429 | 2.2e-14 | 53.3 | 4.3e-16 | 1.6e-12 | 47.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30078.t1 | gi|67967800|dbj|BAE00382.1| | unnamed protein product [Macaca fascicularis] | 0.0 |
| pfu_aug2.0_49.1_30078.t1 | gi|634877746|ref|XP_007949609.1| | PREDICTED: guanine nucleotide-binding protein-like 1 isoform X2 [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_49.1_30078.t1 | gi|694915365|ref|XP_009449096.1| | PREDICTED: guanine nucleotide-binding protein-like 1 isoform X1 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_49.1_30078.t1 | gi|634877743|ref|XP_007949608.1| | PREDICTED: guanine nucleotide-binding protein-like 1 isoform X1 [Orycteropus afer afer] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30078.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30078.t1 atgccaagaaagaagcctttcagtaacaagcaaaagaaactccagcttcaagaaaagagaaaacgaaaaaatgaagcaaa agtatatgatgatggttcagatgatgagattgaaaatgacgaaaaagaggagaagcagagagaagggactgggtatggag gtcacaaggtcaaggtcaaaccgataaatcatcaaccagaagaaattcctgacagaaaaattaatcctaacaggtatagg ttacacttcttcaaggaaagtaaaacagagatagaaagaaggaaacttgaagccaggaaaacattaacaaagaagaatga ggaggatttggaaattgattttgaagaggtttatcagccaggctctgtgttagatataccaatacgaccacggtggagtt actctatgtcaaaagcaaagctagaagccaatgaagaaaaatattttcagggttatctggacggtatatttgatgcttac gctacagaaggtctgagttactttgagatgaatctagagacgtggcgacagttatggagagtgttagagatgtcagatgt catactgcttattgtagatatcagatatccgcttattatagatatcagatatccagtgagtgccagtagagaacacacta ttgtagatatcagatatctggtccttcacttttctccagttctgtatagctatgtaacagagagactacacaaacatgtg atagtagtacttaataagatagacctggtacctgccagtgtagttacagcatggaaacattacctattagagaagtatcc gtacctcaaagtcgtactgtttacgtcatttcctaaagaatatatacagggaggtgaaaatgagcagcaagtcaaagcca agaagaagaggaagaaaggaggaagatttacgcaggcaagtggtgcgagggaattacttagagtgtgtgaagatattgta ggagataaagttgatttgagtagctgggaggaaaagcttgatatggagggttcctggcctgagggtgagggtgaggagga gagtgaggatgaagaggactctggtcctacagaacaagagatgtttaaggacggtgtcctcaccttaggctgtgtagggt atcccaatgttggtaaatcatcagtactaaatggactggttggtaaaaaggtagtgagtgtatcgaggacaccaggccat actaagcacttccaaaccatctatttaatgtctacagtaaagctgtgtgactgtccgggactcgtctttccctccttgat agataaatcactgcagatattagctggtatataccctatagcccaggtacaggagccgtatacccctgttggatttatag gagaaagaatagatataccaggtattctacatttacagcaccctgcaggggacacggaatggagtgcatatgatatttgt gaagattatctcttgcataccaggaacggaatgcttttgagacaggaagttgacgagaaaaaaaagaacatatctggtga tgataaaatggtttcattccttggaacattgccatcgatagagtcggtgtcgtctgcactcccggctgtagtcttggact atatgacggaatctcaactcaccgaaacttaccacatgatccagaaggcagccaagtacggacatgggttcggatttcaa gaattcagttccgaggacgattttagaaacgaaatttcaggaagcagatgctttgccgtaacttgcaaggaagagggaac gctactggcgagtttaattctagcacaaagtaaattttacagaggttccgatcaagttgtggacccttatatcatagtca aatattcggacagatgtaagggccttggggaattttgtatgcgacaggcgataaaattgtcagtctccttcggttacatc gccatgtacatcgataccttcgccaataatgtggctatactccgaatcattgacaaaataggaggatttcagcaagttgg ctgccttcccgttggaggctgtcttcctagtggaaagttcgtgccgtctataattttctacaagaannnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgctga |
|
Protein
| Protein ID | pfu_aug2.0_49.1_30078.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30078.t1 MPRKKPFSNKQKKLQLQEKRKRKNEAKVYDDGSDDEIENDEKEEKQREGTGYGGHKVKVKPINHQPEEIPDRKINPNRYR LHFFKESKTEIERRKLEARKTLTKKNEEDLEIDFEEVYQPGSVLDIPIRPRWSYSMSKAKLEANEEKYFQGYLDGIFDAY ATEGLSYFEMNLETWRQLWRVLEMSDVILLIVDIRYPLIIDIRYPVSASREHTIVDIRYLVLHFSPVLYSYVTERLHKHV IVVLNKIDLVPASVVTAWKHYLLEKYPYLKVVLFTSFPKEYIQGGENEQQVKAKKKRKKGGRFTQASGARELLRVCEDIV GDKVDLSSWEEKLDMEGSWPEGEGEEESEDEEDSGPTEQEMFKDGVLTLGCVGYPNVGKSSVLNGLVGKKVVSVSRTPGH TKHFQTIYLMSTVKLCDCPGLVFPSLIDKSLQILAGIYPIAQVQEPYTPVGFIGERIDIPGILHLQHPAGDTEWSAYDIC EDYLLHTRNGMLLRQEVDEKKKNISGDDKMVSFLGTLPSIESVSSALPAVVLDYMTESQLTETYHMIQKAAKYGHGFGFQ EFSSEDDFRNEISGSRCFAVTCKEEGTLLASLILAQSKFYRGSDQVVDPYIIVKYSDRCKGLGEFCMRQAIKLSVSFGYI AMYIDTFANNVAILRIIDKIGGFQQVGCLPVGGCLPSGKFVPSIIFYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXC |
|