Gene
| Gene Model ID | pfu_aug2.0_49.1_30079 |
|---|---|
| Locus | scaffold49.1 : 418681 ... 425554 : - |
| To GenomeBrowser | scaffold49.1:418681..425554 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_9605.1_60635 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30079.t1 | 6 | 1 | zf-C2H2 | 794 | 813 | 4.8e-09 | 36.0 | 0.087 | 430.0 | 1.5 |
| pfu_aug2.0_49.1_30079.t1 | 6 | 2 | zf-C2H2 | 847 | 869 | 4.8e-09 | 36.0 | 0.15 | 720.0 | 0.8 |
| pfu_aug2.0_49.1_30079.t1 | 6 | 3 | zf-C2H2 | 873 | 896 | 4.8e-09 | 36.0 | 0.00079 | 3.9 | 8.0 |
| pfu_aug2.0_49.1_30079.t1 | 6 | 4 | zf-C2H2 | 903 | 924 | 4.8e-09 | 36.0 | 2.7e-05 | 0.13 | 12.6 |
| pfu_aug2.0_49.1_30079.t1 | 6 | 5 | zf-C2H2 | 933 | 955 | 4.8e-09 | 36.0 | 7.0e-07 | 0.0035 | 17.6 |
| pfu_aug2.0_49.1_30079.t1 | 6 | 6 | zf-C2H2 | 961 | 983 | 4.8e-09 | 36.0 | 3.3e-08 | 0.00016 | 21.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30079.t1 | gi|542254749|ref|XP_005463098.1| | PREDICTED: zinc finger protein 568-like isoform X1 [Oreochromis niloticus] | 6.0e-20 |
| pfu_aug2.0_49.1_30079.t1 | gi|542224798|ref|XP_005451713.1| | PREDICTED: zinc finger protein 484-like isoform X2 [Oreochromis niloticus] | 6.0e-20 |
| pfu_aug2.0_49.1_30079.t1 | gi|573909497|ref|XP_006642467.1| | PREDICTED: zinc finger protein 436-like [Lepisosteus oculatus] | 7.0e-20 |
| pfu_aug2.0_49.1_30079.t1 | gi|542224796|ref|XP_005451712.1| | PREDICTED: zinc finger protein 484-like isoform X1 [Oreochromis niloticus] | 8.0e-20 |
| pfu_aug2.0_49.1_30079.t1 | gi|665798834|ref|XP_008547307.1| | PREDICTED: Krueppel homolog 1-like [Microplitis demolitor] | 8.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30079.t1 atggacagaatgagtatccaagtggaaccattagatctcagaatcaagaagaaaacagacacaatagtgacatcaacatc aaagtctcattcagtgttaaatgaccgtatcaacacaaaaaattacttctgggagcacagcaaaaataagaaaaacaact tggcgtttccttatgttaacgttggtgaacctgtcgataccaaaatccgtagccacattccactacaggctccacaaact ccaagtttgtataatggagactcaaagccagtatttaatatcacttctaaacatagcagtttaccaagctctagatgtat gttagattcagccagtccacatgtcaataagggatctcatacaacatattgtgtaaggaaacctgctatgggtaatttga atccaagcatgagagctcataatcataatttgattcatattggtcaaccaagtgtacagagtacagtacaccaaagtgca actaattatggttatgatagcaactttcatactccatatttttacggtaacacatggattcctcctttcagaagtatgga taacttgagctctccaagttccaattctagacagttaaataatagcttggatgcaagccttaatacctctaccaaattta aaaggaaccaagagttagttcgaagttacctatcaagagttcctgataggaccttatctcagtactcattttcttctgga tatgacgtgtttccaaagaaagttccatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnagttacacagtaactgtaccccaagccttaccatttacctcattgagggaagaa aatattgcaactctaccccaagccgtatcatttactacattgaaagaagaaaatattgcaacggtccctccatttaacat gttgaaagaggaaaataaagcaacagggcataaacattcaatgtgccatattaacaaactcaaagacataaataacaatg attctgtaaaagctcctctgcgaaggattgcacctaaacagcctcaaatcctgatgcctcctgtcatgagttggtccaac ccatctttcatgcaggacacagtactctctcccgcttcaaagaggaaattaattgggaattccaatacccagaaatttcc aaaatcacctaacagaactgttccattgatgagtaatcgaaacgtaccaaatccattccagagacagccagtaacaatca acaacacagcaaccttacacttgtacctcctgaacaacgaacgtttaccggggacgacctggaagagtaaagatgataac aacaatgatcagacagtggactgtgcctacagcaagcagagcataattgaaataaaaccaatggaacagacggggacgct ggaaagtacgtggactgctcaccctgaaggagaatcacagaaagacgttaccagtacgatcaatgctaatgatgagagga gaaggcagagtgctaatcactgtgatgaagatgtcaaatcaaattatatgacatataagaacatcaacaaaacttcacca aagcatggaagatacccagtatattcagtgctcccctatcaacaagatgaagctaagccgtggacagagaagatgtcaaa tgtgactgtgtataaaccaaaatattacttcatgaacaaattcagtcaaacaagtgatgatgataataacaatgaaacaa atgatgataagtacttagatgataaaaaggtatcgacatgcgatatcaaagatgaatcacttgattctgggaatgacaca gattctgatgatacttggaattacagcgagggatttgaaaagtggatcagcgatttatacagtcggagggattttgagca tgaagataacaataatgttaattctgggaacgggtctcaaatggaaatatcttcatgtgaaccattccaaagaaagatgt cagcgcaacggattgatgtaccgtcacaaagtgttacttgtaatcacagtgatacctatgtgcacaagttaaagaaattt tctgatttcgttccaaagaatgaagacaggaagagaaaattctctgtttcagttccaaagaatgaagaaaggaagaagaa attctccaaatcagtcccaaagaatgaagagaggaggaataaaaaggaaagaagaagaagaaaggtgcctgcaatacctg taggtggtttgggagtaaattcaccgagtgatcttgacgattgtgaagcattctactggtgtcattgttgtgagagatct gtcaagcattttaatgtcagatcacattttacggagcacgggaatgaaggtgacataaatctggataattatctactcca ggtatacggacatgtgacaaaacactggaaaggatacaataaggagggacgttgtgtttatctgtgtgggttatgtgatc aggcaatgttataccatcagggatttagatggcacattctgacccatggcagggggcataggtgtgatagatgtaacaaa ttgtttctatcaaagaagaagctcacaagacaccagaattatggatgtgatgccaagatgaactgctgcagcacgtgtgg tcgtaagttctccagcagcaagcatatgaagatccatattgcgcgtgtccactgtcgtgctcgtgcctctaacgtttata agtgttcgtattgtggtaaatgcctgtctagccggggtagtctgacaacccacactcgtctacatacaggtataaacccg tacaggtgtaacgtgtgtggcaggagttacccccaaaacgtgcaactcaaactacatatgaaagtacataggaagactga tccgtaa |
|
Protein
| Protein ID | pfu_aug2.0_49.1_30079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30079.t1 MDRMSIQVEPLDLRIKKKTDTIVTSTSKSHSVLNDRINTKNYFWEHSKNKKNNLAFPYVNVGEPVDTKIRSHIPLQAPQT PSLYNGDSKPVFNITSKHSSLPSSRCMLDSASPHVNKGSHTTYCVRKPAMGNLNPSMRAHNHNLIHIGQPSVQSTVHQSA TNYGYDSNFHTPYFYGNTWIPPFRSMDNLSSPSSNSRQLNNSLDASLNTSTKFKRNQELVRSYLSRVPDRTLSQYSFSSG YDVFPKKVPCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYTVTVPQALPFTSLREE NIATLPQAVSFTTLKEENIATVPPFNMLKEENKATGHKHSMCHINKLKDINNNDSVKAPLRRIAPKQPQILMPPVMSWSN PSFMQDTVLSPASKRKLIGNSNTQKFPKSPNRTVPLMSNRNVPNPFQRQPVTINNTATLHLYLLNNERLPGTTWKSKDDN NNDQTVDCAYSKQSIIEIKPMEQTGTLESTWTAHPEGESQKDVTSTINANDERRRQSANHCDEDVKSNYMTYKNINKTSP KHGRYPVYSVLPYQQDEAKPWTEKMSNVTVYKPKYYFMNKFSQTSDDDNNNETNDDKYLDDKKVSTCDIKDESLDSGNDT DSDDTWNYSEGFEKWISDLYSRRDFEHEDNNNVNSGNGSQMEISSCEPFQRKMSAQRIDVPSQSVTCNHSDTYVHKLKKF SDFVPKNEDRKRKFSVSVPKNEERKKKFSKSVPKNEERRNKKERRRRKVPAIPVGGLGVNSPSDLDDCEAFYWCHCCERS VKHFNVRSHFTEHGNEGDINLDNYLLQVYGHVTKHWKGYNKEGRCVYLCGLCDQAMLYHQGFRWHILTHGRGHRCDRCNK LFLSKKKLTRHQNYGCDAKMNCCSTCGRKFSSSKHMKIHIARVHCRARASNVYKCSYCGKCLSSRGSLTTHTRLHTGINP YRCNVCGRSYPQNVQLKLHMKVHRKTDP |
|