Gene
| Gene Model ID | pfu_aug2.0_49.1_30083 |
|---|---|
| Locus | scaffold49.1 : 457193 ... 478024 : - |
| To GenomeBrowser | scaffold49.1:457193..478024 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_12519.1_39346 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30083.t1 | 10 | 1 | zf-H2C2_2 | 292 | 312 | 6.1e-26 | 89.4 | 0.0066 | 9.8 | 6.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 1 | zf-C2H2_4 | 302 | 323 | 8.4e-11 | 41.4 | 0.00061 | 0.9 | 10.0 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 1 | zf-C2H2_jaz | 302 | 320 | 1.3e-07 | 31.5 | 0.011 | 17.0 | 5.7 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 1 | zf-C2H2 | 302 | 325 | 6.0e-25 | 86.0 | 3.0e-05 | 0.044 | 14.1 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 2 | zf-H2C2_2 | 428 | 440 | 6.1e-26 | 89.4 | 0.0038 | 5.7 | 7.4 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 2 | zf-C2H2_4 | 431 | 453 | 8.4e-11 | 41.4 | 0.013 | 19.0 | 5.8 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 2 | zf-C2H2_jaz | 431 | 441 | 1.3e-07 | 31.5 | 1.8 | 2600.0 | -1.3 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 2 | zf-C2H2 | 431 | 453 | 6.0e-25 | 86.0 | 0.00013 | 0.19 | 12.1 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 3 | zf-H2C2_2 | 445 | 470 | 6.1e-26 | 89.4 | 0.0013 | 1.9 | 8.9 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 3 | zf-C2H2_4 | 459 | 481 | 8.4e-11 | 41.4 | 9.0e-05 | 0.13 | 12.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 3 | zf-C2H2 | 459 | 481 | 6.0e-25 | 86.0 | 0.00022 | 0.33 | 11.3 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 3 | zf-C2H2_jaz | 460 | 477 | 1.3e-07 | 31.5 | 1.2 | 1800.0 | -0.8 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 4 | zf-H2C2_2 | 474 | 496 | 6.1e-26 | 89.4 | 5.1e-06 | 0.0075 | 16.5 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 4 | zf-C2H2_4 | 487 | 509 | 8.4e-11 | 41.4 | 0.003 | 4.5 | 7.8 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 4 | zf-C2H2_jaz | 487 | 509 | 1.3e-07 | 31.5 | 0.0072 | 11.0 | 6.3 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 4 | zf-C2H2 | 487 | 509 | 6.0e-25 | 86.0 | 0.00028 | 0.41 | 11.0 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 5 | zf-H2C2_2 | 502 | 526 | 6.1e-26 | 89.4 | 0.00012 | 0.18 | 12.1 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 5 | zf-C2H2_jaz | 515 | 535 | 1.3e-07 | 31.5 | 0.0028 | 4.1 | 7.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 5 | zf-C2H2 | 515 | 537 | 6.0e-25 | 86.0 | 1.0e-06 | 0.0015 | 18.7 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 5 | zf-C2H2_4 | 516 | 537 | 8.4e-11 | 41.4 | 7.4e-05 | 0.11 | 12.8 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 6 | zf-H2C2_2 | 529 | 552 | 6.1e-26 | 89.4 | 2.6e-12 | 3.9e-09 | 36.3 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 6 | zf-C2H2_4 | 543 | 565 | 8.4e-11 | 41.4 | 0.0073 | 11.0 | 6.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 6 | zf-C2H2_jaz | 543 | 565 | 1.3e-07 | 31.5 | 1.2e-07 | 0.00018 | 21.5 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 6 | zf-C2H2 | 543 | 565 | 6.0e-25 | 86.0 | 6.8e-06 | 0.01 | 16.1 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 7 | zf-H2C2_2 | 560 | 581 | 6.1e-26 | 89.4 | 2.0e-06 | 0.003 | 17.7 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 7 | zf-C2H2 | 571 | 582 | 6.0e-25 | 86.0 | 0.012 | 18.0 | 5.9 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 7 | zf-C2H2_jaz | 571 | 583 | 1.3e-07 | 31.5 | 0.052 | 77.0 | 3.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 7 | zf-C2H2_4 | 572 | 580 | 8.4e-11 | 41.4 | 0.33 | 500.0 | 1.4 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 8 | zf-H2C2_2 | 583 | 596 | 6.1e-26 | 89.4 | 0.00013 | 0.19 | 12.0 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 8 | zf-C2H2 | 586 | 608 | 6.0e-25 | 86.0 | 1.4e-07 | 0.0002 | 21.4 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 8 | zf-C2H2_4 | 586 | 608 | 8.4e-11 | 41.4 | 5.4e-05 | 0.08 | 13.3 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 8 | zf-C2H2_jaz | 586 | 609 | 1.3e-07 | 31.5 | 1.5e-05 | 0.023 | 14.8 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 9 | zf-H2C2_2 | 603 | 624 | 6.1e-26 | 89.4 | 6.3e-05 | 0.093 | 13.0 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 9 | zf-C2H2 | 614 | 636 | 6.0e-25 | 86.0 | 6.7e-06 | 0.0099 | 16.1 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 9 | zf-C2H2_4 | 614 | 635 | 8.4e-11 | 41.4 | 0.015 | 23.0 | 5.6 |
| pfu_aug2.0_49.1_30083.t1 | 9 | 9 | zf-C2H2_jaz | 614 | 629 | 1.3e-07 | 31.5 | 0.1 | 150.0 | 2.7 |
| pfu_aug2.0_49.1_30083.t1 | 10 | 10 | zf-H2C2_2 | 628 | 640 | 6.1e-26 | 89.4 | 0.27 | 390.0 | 1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30083.t1 | gi|528524027|ref|XP_005174664.1| | PREDICTED: zinc finger protein 239-like isoform X1 [Danio rerio] | 3.99931e-42 |
| pfu_aug2.0_49.1_30083.t1 | gi|688618749|ref|XP_005169719.2| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like [Danio rerio] | 9.99967e-42 |
| pfu_aug2.0_49.1_30083.t1 | gi|612015647|ref|XP_007490773.1| | PREDICTED: zinc finger protein 347-like isoform X2 [Monodelphis domestica] | 1.99993e-41 |
| pfu_aug2.0_49.1_30083.t1 | gi|612015645|ref|XP_007490772.1| | PREDICTED: zinc finger protein 347-like isoform X1 [Monodelphis domestica] | 1.99993e-41 |
| pfu_aug2.0_49.1_30083.t1 | gi|296477393|tpg|DAA19508.1| | TPA: zinc finger protein 682-like [Bos taurus] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30083.t1 atgcttggaaggttatcgagggagccaattgatgatgacgatgaagccatgattgtgtactggaacaaaaaggagagaaa gattcatcatggtggatccatgggcggacaactatttatagaacagaatcaaactgtggccaagttttatcagttctgca gtgaaatctacaaggcctataagggatttggatcagaagcctcagttaaaccttccattaaagagacatccatcctcaat ctaaatactgatacttcaatcatagaggaggtcaaggtcaaagatcagatgattacagacgtaacctctacacattctaa catagactcagtgtcctctactcatcctaatgtagactctgtaacctgtgaattttcagacatggaggaggctgatgatc ctttaccctgtggttttgaagacaactctggccacacaagtaatgatgaagtagaagcagaggtcaaggtcatggataaa aagataaatcgtaaggaaagaaaaccaccaatgaaaggaaagagaccaagacgcagaaagaaaactcatcttagcaatcc agttaaaaggcataggattaggaaaaaagttgacgtgaaggggactgaagtgaaagcagaaattaagaattctatgatca aatgtaaacagagagagaaagctgaatctggttatattgaaatagaagataagaaactcaattctatatctcagattaag gtagaggcttgtggcagtgattctgtctctgttcacctacagaagaatgccgatatcaataccgacattagtaaacatga agaagatattaaggaggaggagtgtttagacaatagtgaaaatggcctccaagggaaaggtgagttagatggtcatgtag aaaaacatacaattactcttacctataaatgtcacaagtgtgataaagtatgcagcagttctgaggaataccaaaaacat gttgaaaaatactgcccagtgattgtgaaaccttcatcaagtcagaatagtaacgacaccaaggactctctgttgaatca taaaccatgtgaccagcaggtggaagggaacgaaggtacggacagctcacataatgaattaaagacatcacaaggggagg agaagtctcatattgttgaagtaacagattctgcagatgatgaaggtaaaaaggtagataaccagcaaactaaatcagtg gatgatgaaaacaaagaaatgattagtgaaaccgacaatgataaagaaaaacagaacatagtgttcaagcatagccgtga cccagagggtcatacatgtgataagtgtggaagaacgtttcaatttgcgatggctctttacaaacataaacttttacatg atgacaatggtatgttcccttgtcgattctgccatctcacgttcgaaactagcgagaagctaaccagacattccatcgtt cacagagctgtcaagccgtatgtttgtacgagttgtaaggcaggattcatggagccggagcagctagaggagcacgtgaa gaaacataaacgaggacggacgtttatgtgtgaggagtgtggtaaatgttacgctacgaacttgagccttcgaactcata tgagaaatcatacaggtgtacgtccgtataaatgtaaatactgcgataagaggtttatatcttctgaaaccaagaaagtt catgaaaacacacacaccaaggagagggcattcatgtgtgatatatgtggtatggtattctatcgagagaagccattttc ctgttcatactgtggcaaggcattttcagacaagagtaacaagacgcagcatgaaaaaactcactggaaagtcaaacctt tttcttgtaatgagtgtggaaaaggcttcgtgcttcagcgggatttgttacgacactccaaaattcatcagacaggagag tccatgcttcttcatcctgtaataccgaaaaggaaaagaggaagacctgcagaacagttaggtactttacaaaatgtaga atcggaggaagatcgtaggcagcgagagatcaaagttcagattgatcacctgaccagtaaggaggcggggcttcatgttc ctgtcagtgataatatatcacatcagtacgtcatggctgatggatatttacatgtatctaattctcaaagttttgttgaa caagaagttatatatgacagtgctcagaataactcaaactttaatatcctcattttgtaa |
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Protein
| Protein ID | pfu_aug2.0_49.1_30083.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30083.t1 MLGRLSREPIDDDDEAMIVYWNKKERKIHHGGSMGGQLFIEQNQTVAKFYQFCSEIYKAYKGFGSEASVKPSIKETSILN LNTDTSIIEEVKVKDQMITDVTSTHSNIDSVSSTHPNVDSVTCEFSDMEEADDPLPCGFEDNSGHTSNDEVEAEVKVMDK KINRKERKPPMKGKRPRRRKKTHLSNPVKRHRIRKKVDVKGTEVKAEIKNSMIKCKQREKAESGYIEIEDKKLNSISQIK VEACGSDSVSVHLQKNADINTDISKHEEDIKEEECLDNSENGLQGKGELDGHVEKHTITLTYKCHKCDKVCSSSEEYQKH VEKYCPVIVKPSSSQNSNDTKDSLLNHKPCDQQVEGNEGTDSSHNELKTSQGEEKSHIVEVTDSADDEGKKVDNQQTKSV DDENKEMISETDNDKEKQNIVFKHSRDPEGHTCDKCGRTFQFAMALYKHKLLHDDNGMFPCRFCHLTFETSEKLTRHSIV HRAVKPYVCTSCKAGFMEPEQLEEHVKKHKRGRTFMCEECGKCYATNLSLRTHMRNHTGVRPYKCKYCDKRFISSETKKV HENTHTKERAFMCDICGMVFYREKPFSCSYCGKAFSDKSNKTQHEKTHWKVKPFSCNECGKGFVLQRDLLRHSKIHQTGE SMLLHPVIPKRKRGRPAEQLGTLQNVESEEDRRQREIKVQIDHLTSKEAGLHVPVSDNISHQYVMADGYLHVSNSQSFVE QEVIYDSAQNNSNFNILIL |
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